Detailed information of amic_s0004.g6.t1 in Acropora microphthalma

Genomic Location: sc0000004_pilon:92191...100875
NR annotation: XP_015754755.1, PREDICTED: protein LTV1 homolog [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4V838Protein LTV1 homolog OS=Xenopus laevis OX=8355 GN=ltv1 PE=2 SV=1
Q6NSQ7Protein LTV1 homolog OS=Mus musculus OX=10090 GN=Ltv1 PE=1 SV=2
Q68FR7Protein LTV1 homolog OS=Rattus norvegicus OX=10116 GN=Ltv1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006410 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04180
all species →		LTVLow temperature viability protein FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007307
all species →		FamilyLow temperature viability protein Ltv1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21531
all species →		LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000056
all species →		Biological Processribosomal small subunit export from nucleusInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0030688
all species →		Cellular Componentpreribosome, small subunit precursorInterproscan
GO:0042274
all species →		Biological Processribosomal small subunit biogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0004.g6.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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