Gene detail

Detailed information of amic_s0004.g79.t1 in Acropora microphthalma

Genomic Location: sc0000004_pilon:1100040...1112677
NR annotation: AFZ78088.1, alpha i G protein [Acropora palmata]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0004.g79.t1

CTATTCTTCCCGTCGGTCATGCGCGCGGGGTTTTTGCTTGTGCGGGCGTGGTAGTGACAGTAGTGGTTGGTTCTTCCAACAAAAGCGAAGTAAGGAGCAGCAGTATTACTGTTACGAAAGTGAAGGGAAACCTACATGGCGAAGTCGTGAGGGATTTCGATATATGTGCTTCGGGTAAAAGACGCCCCAAGACGTCCAATTATAGTTCTGGGCTTGTGTTTCCTGTAGTGAATATTGCGAGGTTGCGAAAGTTCACACTTCGATCAACCGTGCTTTTGCCATAGAAGTTAGCTCTACGTAGTCCTAACTCGATAACAAACATGGGATGCACAATCAGTGGCGAAGACAAGGCGGCCGTAGAGCGGAGTAAAATGATAGATAAGACGCTTCGTGCGGACGGCGAGAAAGCGGCGAGGGAAGTCAAGCTTCTCCTTTTGGGTGCTGGTGAATCAGGGAAGAGCACAATTGTGAAACAGATGAAAATTATTCATGAACATGGTTACACCCAGGAGGAATGTGCACAGTATAGGCAAGTTGTGTACAGCAATACAATTCAGTCAATGATTGCCATTATTAGAGCATTAGGAACATTGAAGATTGAATTTGGACACTTGGACAGAGCTGATGATGCAAGGGAGCTCTTTGCCTTGGCAGGAAGTATGGAAGATGTGAAATTCACGCCAGAGCTGGTCTCTATTATGAAGAGGTTATGGAATGACTCCGGAGTGCAAAACTGCTTTTCAAGATCGAGGGAATATCAACTGAACGATTCAGCTTCATACTACTTGAATGAGCTTGACAGACTAGGATCACCAAGTTACGTTCCAACAGAACAAGATGTTCTTAGAACAAGAGTGAAAACAACTGGAATTGTTGAGACTCATTTTACTTTCAAAGATTTACATTTCAAGATGTTTGATGTTGGAGGCCAGAGGTCTGAACGAAAGAAATGGATTCACTGCTTTGAAGGTGTTACCGCTATTATCTTCTGTGTGGCTCTGAGTGCATATGATCTTGTGCTGGCAGAAGACGAGGAAATGAACCGCATGATGGAAAGCATGAAGCTATTTGACTCCATCTGTAACAACAAGTGGTTCACTGACACTTCCATAATCCTCTTCCTCAACAAGAAAGATTTGTTTGGAGCAAAAATCACACATTCACCTTTGACCATCTGCTTCCCAGAGTACACAGGTTCAAACACATACGAGGAAGCTGCGGCGTATATCCAACTTCAGTTTGAGAATCTCAACAAGAGAAAGGACACAAAGGAGATTTACACTCATTTTACTTGTGCCACTGATACAAACAACATCCAGTTTGTGTTTGATGCTGTCACAGATGTCATCATTAAGAACAACCTCAAGGATTGTGGACTCTTCTAACTTTGTCTGTCCAAAGTATTTGTACAAAAAGATGTGCTGATCGCTATTTCTGTGTACAGACCTCACAAGCTAttattttctcttttttttttttttGTAAAATTGTCTAGTAACATAACGGTCTGTGCACGTAGAATGGGCCAAGCATCAGTTAATGACAAACAACTTGCACAGTCAGTCATATATGCGAGCTTGCAGCGTGATGTCAAAACAGTGTTAATCCCCAAGAAAGTATTTCAGAGTTGTAAAAAAACAAAAAAATAGCAGCAATCATACTAATATAAATTCAAAGACTGCCTGACTTGCCAGGAGCATGTAGGATCTAGCAATAAACATTGTTTTCTATGTTGGTGAATAGCTTGTAATAATAATTATAAATATAATTAAAGTGAAATGATGTTTTTTGTCCACTATTTGTTTTTCTCTGGAGAAAGCCATCAAGTTGAGTGATACTTGATAACTATAACTTGTAGGTTGAAACAGTTAAGTTTGTCGTGTTCTCCTCTTTGGAGTTACAACCATCAAGTTAATTCCTTGACTGAAGTCTTGCTTCTACAAAAATCAAAGTGCAATAGTAAAGTTGTCATGTCTGCATTGTGTGACAACCTACCAATTATTGGTAAATACAATCCTTGTAAACAACCAATAAGTGCATTTCGGTAACTGCAGTTACGTGGCAAAAGTTTCTCAATACATTAGTAGCAGTGTTTATTTACCTACACAATAACTTGAAAGGAACCCATCTGTAAATTAGGGGTCTTGGTTGATTCAAGAAAGGACTATTAATAAAAAGATGATTTTAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P30676	Guanine nucleotide-binding protein G(i) subunit alpha OS=Patiria pectinifera OX=7594 PE=1 SV=3
P38400	Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Canis lupus familiaris OX=9615 GN=GNAI2 PE=2 SV=2
P38402	Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Cavia porcellus OX=10141 GN=GNAI2 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000689 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00503 all species →	G-alpha	G-protein alpha subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001019 all species →	Family	Guanine nucleotide binding protein (G-protein), alpha subunit	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10218 all species →	GTP-BINDING PROTEIN ALPHA SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0019001 all species →	Molecular Function	guanyl nucleotide binding	Interproscan
GO:0031683 all species →	Molecular Function	G-protein beta/gamma-subunit complex binding	Interproscan
GO:0001664 all species →	Molecular Function	G protein-coupled receptor binding	Interproscan
GO:0005834 all species →	Cellular Component	heterotrimeric G-protein complex	Interproscan
GO:0007188 all species →	Biological Process	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0004.g79.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.