Detailed information of amic_s0005.g100.t2 in Acropora microphthalma

Genomic Location: sc0000005_pilon:1397298...1411779
NR annotation: XP_029213400.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114976988 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IY33MICAL-like protein 2 OS=Homo sapiens OX=9606 GN=MICALL2 PE=1 SV=1
D3ZEN0MICAL-like protein 2 OS=Rattus norvegicus OX=10116 GN=Micall2 PE=1 SV=2
Q3TN34MICAL-like protein 2 OS=Mus musculus OX=10090 GN=Micall2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008128 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307
all species →
CHCalponin homology (CH) domainDomainInterproscan
PF12130
all species →
bMERB_domBivalent Mical/EHBP Rab binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781
all species →
DomainZinc finger, LIM-typeInterproscan
IPR001715
all species →
DomainCalponin homology domainInterproscan
IPR036872
all species →
Homologous_superfamilyCH domain superfamilyInterproscan
IPR022735
all species →
DomainbMERB domainInterproscan
IPR050540
all species →
FamilyF-actin Monooxygenase MicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23167
all species →
CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0005.g100.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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