Gene detail

Detailed information of amic_s0005.g145.t2 in Acropora microphthalma

Genomic Location: sc0000005_pilon:1905587...1911407
NR annotation: XP_029193097.2, transcription elongation factor, mitochondrial-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008563 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09159 all species →	Ydc2-catalyt	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015242 all species →	Domain	Mitochondrial resolvase Ydc2, catalytic	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR039150 all species →	Family	Transcription elongation factor, mitochondrial	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21053 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0006390 all species →	Biological Process	mitochondrial transcription	Interproscan
GO:0006392 all species →	Biological Process	transcription elongation by mitochondrial RNA polymerase	Interproscan
GO:0030337 all species →	Molecular Function	DNA polymerase processivity factor activity	Interproscan
GO:0042645 all species →	Cellular Component	mitochondrial nucleoid	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0005.g145.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.