Detailed information of amic_s0005.g35.t2 in Acropora microphthalma

Genomic Location: sc0000005_pilon:578380...594568
NR annotation: XP_015762558.1, PREDICTED: thrombospondin-type laminin G domain and EAR repeat-containing protein-like isoform X1 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003314 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF03736
all species →		EPTPEPTP domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009039
all species →		RepeatEARInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan
IPR005492
all species →		RepeatLeucine-rich glioma-inactivated , EPTP repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15261
all species →		THROMBOSPONDIN-TYPE LAMININ G DOMAIN AND EAR REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0005.g35.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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