Detailed information of amic_s0008.g87.t2 in Acropora microphthalma

Genomic Location: sc0000008_pilon:1227898...1262105
NR annotation: XP_029203019.1, COP9 signalosome complex subunit 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99LD4COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1
P97834COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV=1
Q6NRT5COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10602RPN726S proteasome subunit RPN7RepeatInterproscan
PF01399PCIPCI domainDomainInterproscan
PF01120Alpha_L_fucosAlpha-L-fucosidaseDomainInterproscan
PF21151CSN1_CCOP9 signalosome complex subunit 1, C-terminal helixDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045135Domain26S proteasome regulatory subunit Rpn7, N-terminalInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR000933FamilyGlycoside hydrolase, family 29Interproscan
IPR016286FamilyAlpha-L-fucosidase, metazoa-typeInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR019585Family26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1Interproscan
IPR048624DomainCOP9 signalosome complex subunit 1, C-terminal helixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1414526S PROTESOME SUBUNIT 6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004560Molecular Functionalpha-L-fucosidase activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0006004Biological Processfucose metabolic processInterproscan
GO:0008180Cellular ComponentCOP9 signalosomeInterproscan

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