Detailed information of amic_s0009.g154.t1 in Acropora microphthalma

Genomic Location: sc0000009_pilon:2086398...2097572
NR annotation: XP_029207945.2, F-box/LRR-repeat protein 20-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9QZH7F-box/LRR-repeat protein 20 OS=Rattus norvegicus OX=10116 GN=Fbxl20 PE=1 SV=1
Q58DG6F-box/LRR-repeat protein 20 OS=Bos taurus OX=9913 GN=FBXL20 PE=2 SV=2
Q96IG2F-box/LRR-repeat protein 20 OS=Homo sapiens OX=9606 GN=FBXL20 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005925 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516
all species →
LRR_6Leucine Rich repeatRepeatInterproscan
PF12937
all species →
F-box-likeF-box-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001810
all species →
DomainF-box domainInterproscan
IPR006553
all species →
RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR050648
all species →
FamilyF-box/Leucine-rich repeatInterproscan
IPR036047
all species →
Homologous_superfamilyF-box-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13382
all species →
MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0009.g154.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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