Gene detail

Detailed information of amic_s0010.g125.t2 in Acropora microphthalma

Genomic Location: sc0000010_pilon:1531043...1539486
NR annotation: XP_029189452.2, receptor-type guanylate cyclase gcy-22-like isoform X1 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0010.g125.t2

CGAGGAAGGTCGAATGAGGTTCCAATGTTATCTTACTTGGGAGAATAACCATTCAACTTTGAACAAGTTGGTCAAATTTTGAAAGAACAAGAAAACTTGGAAGAGGACCTTATTACCATTTGTACTAATGAAAAAGAGATATTTGGTTAATGCTGAAGACACTATTTTGTCTTGGAAATTTTATTCTTGATTAATTAAGTAAGTAAAACATGTTATTAAGAAAGTCCTTACATTGCTTGCATCAAGCTAAAATATATCGGGAAAAACAAAGGTTGGCTTCTTGTGATAATATTGTGATTTAGATAGAGATGATGGAGAAAAATTCAGTGATTCTGGCAATCGTTTCAAATTACAACCGTTGAAGATTCCGAAGTTGCGTGAAAAACGCTACTCAACAAAGACATTCCCGATGTGCTTTAGGATGAAGAAGGTGGGAGGGCAGATTTTCGAAAGGGCCATGGGTCAAGAGCTGAACCCAACCGGACGAAGTCAAAACAAAGTTGTAAAAGTGCTTCGTATGTGCTGGCGATATGACGTCACTACATCAGCTGGTCGCCGATTGCAGTCATTTAAGATCATCAGTGTTGCTATGGTATCCATGTTCGGTTTACTTTTCTTTGTAGCTGAAGATGTTTACAACGCAAACGTGATCATAAAGCGAGCGAACGCGTTGAACGAAAACTTGCAATCCAGTTTGCAAGTTGCATATTTGATCCATCGACTGCAAATCGAACGAGGTTTGACTGTGATGTGCATGGGAGCCAGTGACGAAGCAGCAAAGAAAAATGTCTTAATGAATTTAACTGATGCTCGTGAGAAAACCGACGAAGCCCTCCGAGATACTAAATGGCCTTTTGATGAAAATGTGGAAGCTGAGTTTCTTCGTGGAGATGACACTTTCCAAAATCATTTGAATAAACACAGGAACGAGGTTGGAAATTGTGGAAATGGCAGTGCAGGAGAGGAAATTTCCTTCTACACACAACCTATTGACTGGATGCTCGACTGGTTTTATTCAGCCCTCCAGGAAACATCCGGAAATCCAATTTTCATTGACATGATTGGCTATCACAGATTCCTATCTGGTAAAGATAAAATCGGAATTGAGAGGGCGCTTGGTGGATCTTTCTTTGCGATGGGTTACTTCCAGAATTTAAACCAGACATTGCGGTATGCAAATTTTCATGTCCTTGGACAGGATTACTTGAACACAAGTGAAAAACTCGTGCCTAACATCAAAGACACAATAAAAAGAGTGGTAAATGATACAGTGGTGAAAGAAATTACGAAACAACGAGAAATTATCCAAGCTAACAAGCCAGGCAATGCATCGGTTGCCAAAAGCCAAGCATGGTTTAATCTAATGACAATGTATCTCGACAATCTTTATGATGTTCAAAAGGAAGCAGGCAAAACACTCATCAATCGTTTGAAAACAGAAAAAGACCACTCTAGCTCCAACTTAATTCAAAGATTATCTTTTCTCGTTTTCGCTTTGGTAATGGTACCAGTATTTATTCTATCGGTGAATCGCATGGTGGGAACTATTCAAAACTACACTTTTCAACTGGCCCAGACCACTCTTCAGCTTAAAGAGGAGAAGACTCGAGCGGATAAGCTGCTTTATCAGATGTTTCCTCATCCTGTAGCGGAACTGCTTAAAAACGATGAGCAAATTCCGGCCGAGTTCTTCAACAGTGTAACAGTCTTCTTTAGTGACATTGTCAACTTCACCGAAATGTGTTCGAGTATGGCTCCTTTGCAGGTCACAGCCATGCTCGATGCAGTGTATGGCTTATTTGACAGCCGAATCAGTCTCTATGACGTCTACAAAGTAGAGACAATCGGTGACGCCTACATGGTTGTATCTGGTCTTCCTCGAAGAAACGGTATACGGCACGCTGACCAAATTGCGCGGATGGCACTGGATCTGCTTGGCGTTGTCAAGGGTTTGAGCTTGCCGGAGTTCTCTCAGTCTTTATCTGTCCGCATTGGTATTCACACAGGTTCCTGTGTTGCTGGTGTAGTGGGCAAAAAAATGCCTCGTTACTGCTTGTTTGGTGATACGGTGAACACGGCTTCGAGGATGCAAACAACTGGAGAACCTCAGACAATCCAAATAACCCAAAACACTAAGGATATCTTGGAAAGGATGGGTGGTTTTTGTATGGACTTCAGATGCAAAATGGAAGTCAAGGGTAAAGGATCCATGTCAACGTTCTGGCTTCGAGGCTTCAAGGACGACTTCAACTACGCCTGTATCGACACAAGTCCTGATCGAACATCATCTGTCATAATGGACATACAACTTTGATTTCCAAAGTTACCAAGATAACCCACGTAATGCACGCACAGTGAGTGCCAAAGATGTAACTATGTTTGGCGTATTTTTCGTGTATGATGAGATTCACTGAGGTATGATGAGAGTAGACGTGATACCAAACAACAGCTTGCCATTGGCCATTGTAAATACCCATTCATACTAAAAGCTCATAGTGTAACACTTAGACTCAGTTCTAATGGAATCAAACTTTTTTGGTTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P16066	Atrial natriuretic peptide receptor 1 OS=Homo sapiens OX=9606 GN=NPR1 PE=1 SV=1
P46197	Atrial natriuretic peptide receptor 2 OS=Bos taurus OX=9913 GN=NPR2 PE=2 SV=1
P20594	Atrial natriuretic peptide receptor 2 OS=Homo sapiens OX=9606 GN=NPR2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002202 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08376 all species →	NIT	Nitrate and nitrite sensing	Family	Interproscan
PF07701 all species →	HNOBA	Heme NO binding associated	Domain	Interproscan
PF00211 all species →	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013587 all species →	Domain	Nitrate/nitrite sensing protein	Interproscan
IPR001054 all species →	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR029787 all species →	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR050401 all species →	Family	Cyclic nucleotide synthase	Interproscan
IPR011645 all species →	Domain	Haem NO binding associated	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11920 all species →	GUANYLYL CYCLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009190 all species →	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0001653 all species →	Molecular Function	peptide receptor activity	Interproscan
GO:0004016 all species →	Molecular Function	adenylate cyclase activity	Interproscan
GO:0004383 all species →	Molecular Function	guanylate cyclase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006182 all species →	Biological Process	cGMP biosynthetic process	Interproscan
GO:0007168 all species →	Biological Process	receptor guanylyl cyclase signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0010.g125.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.