Detailed information of amic_s0010.g129.t1 in Acropora microphthalma

Genomic Location: sc0000010_pilon:1614303...1618587
NR annotation: XP_015759701.1, PREDICTED: rho GTPase-activating protein 100F-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5VT97Rho GTPase-activating protein SYDE2 OS=Homo sapiens OX=9606 GN=SYDE2 PE=1 SV=2
Q9V9S7Rho GTPase-activating protein 100F OS=Drosophila melanogaster OX=7227 GN=RhoGAP100F PE=1 SV=2
D3ZZN9Rho GTPase-activating protein SYDE1 OS=Rattus norvegicus OX=10116 GN=Syde1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007735 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595
all species →		PDZPDZ domainDomainInterproscan
PF00620
all species →		RhoGAPRhoGAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →		DomainPDZ domainInterproscan
IPR035892
all species →		Homologous_superfamilyC2 domain superfamilyInterproscan
IPR052118
all species →		FamilyRho GTPase-activating regulatorInterproscan
IPR008936
all species →		Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR000198
all species →		DomainRho GTPase-activating protein domainInterproscan
IPR000008
all species →		DomainC2 domainInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46150
all species →		RHO GTPASE-ACTIVATING PROTEIN 100FInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005096
all species →		Molecular FunctionGTPase activator activityInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0046578
all species →		Biological Processregulation of Ras protein signal transductionInterproscan
GO:0097060
all species →		Cellular Componentsynaptic membraneInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0010.g129.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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