Detailed information of amic_s0010.g171.t1 in Acropora microphthalma

Genomic Location: sc0000010_pilon:2127518...2135028
NR annotation: XP_029198578.2, uncharacterized protein LOC114963511 isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O35136Neural cell adhesion molecule 2 OS=Mus musculus OX=10090 GN=Ncam2 PE=1 SV=1
A2ASS6Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1
B1Q236Synaptogenesis protein syg-1 OS=Caenorhabditis elegans OX=6239 GN=syg-1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010853 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF13385
all species →		Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47635
all species →		CUB DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0010.g171.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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