Detailed information of amic_s0010.g28.t1 in Acropora microphthalma

Genomic Location: sc0000010_pilon:532560...535762
NR annotation: XP_015769901.1, PREDICTED: ELAV-like protein 3 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28GD4ELAV-like protein 2 OS=Xenopus tropicalis OX=8364 GN=elavl2 PE=2 SV=2
Q60899ELAV-like protein 2 OS=Mus musculus OX=10090 GN=Elavl2 PE=1 SV=1
Q28FX0ELAV-like protein 3 OS=Xenopus tropicalis OX=8364 GN=elavl3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001601 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →		RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →		DomainRNA recognition motif domainInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR002343
all species →		FamilyParaneoplastic encephalomyelitis antigenInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10352
all species →		EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT GInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:1990904
all species →		Cellular Componentribonucleoprotein complexInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0010.g28.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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