Detailed information of amic_s0011.g101.t1 in Acropora microphthalma

Genomic Location: sc0000011_pilon:1197058...1203884
NR annotation: XP_015768881.1, PREDICTED: uncharacterized protein LOC107347465 isoform X1 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5U2X2Sperm-associated antigen 1 OS=Rattus norvegicus OX=10116 GN=Spag1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000290 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00931
all species →		NB-ARCNB-ARC domainDomainInterproscan
PF00515
all species →		TPR_1Tetratricopeptide repeatRepeatInterproscan
PF01753
all species →		zf-MYNDMYND fingerDomainInterproscan
PF13229
all species →		Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR002182
all species →		DomainNB-ARCInterproscan
IPR012334
all species →		Homologous_superfamilyPectin lyase foldInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR006626
all species →		RepeatParallel beta-helix repeatInterproscan
IPR002893
all species →		DomainZinc finger, MYND-typeInterproscan
IPR039448
all species →		DomainRight handed beta helix domainInterproscan
IPR011050
all species →		Homologous_superfamilyPectin lyase fold/virulence factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22904
all species →		TPR REPEAT CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0043531
all species →		Molecular FunctionADP bindingInterproscan
GO:0051879
all species →		Molecular FunctionHsp90 protein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0011.g101.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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