Detailed information of amic_s0011.g161.t1 in Acropora microphthalma

Genomic Location: sc0000011_pilon:2121306...2143802
NR annotation: XP_029205792.2, uncharacterized protein LOC114969619 isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F1M0Z1Triple functional domain protein OS=Rattus norvegicus OX=10116 GN=Trio PE=1 SV=4
Q0KL02Triple functional domain protein OS=Mus musculus OX=10090 GN=Trio PE=1 SV=3
Q86VW2Rho guanine nucleotide exchange factor 25 OS=Homo sapiens OX=9606 GN=ARHGEF25 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005526 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan
PF00169
all species →
PHPH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR051336
all species →
FamilyRho GTPase-activating Guanine Nucleotide Exchange FactorsInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR001849
all species →
DomainPleckstrin homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22826
all species →
RHO GUANINE EXCHANGE FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0019898
all species →
Cellular Componentextrinsic component of membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0011.g161.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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