Detailed information of amic_s0011.g208.t4 in Acropora microphthalma

Genomic Location: sc0000011_pilon:3025954...3061774
NR annotation: XP_029203193.2, LOW QUALITY PROTEIN: triple functional domain protein-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0KL02Triple functional domain protein OS=Mus musculus OX=10090 GN=Trio PE=1 SV=3
O75962Triple functional domain protein OS=Homo sapiens OX=9606 GN=TRIO PE=1 SV=2
F1M0Z1Triple functional domain protein OS=Rattus norvegicus OX=10116 GN=Trio PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000858 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00621
all species →		RhoGEFRhoGEF domainDomainInterproscan
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan
PF00018
all species →		SH3_1SH3 domainDomainInterproscan
PF07653
all species →		SH3_2Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR001452
all species →		DomainSH3 domainInterproscan
IPR000219
all species →		DomainDbl homology (DH) domainInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR001849
all species →		DomainPleckstrin homology domainInterproscan
IPR047054
all species →		DomainKalirin/Triple functional domain protein, pleckstrin homology (PH) domain 1Interproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR035899
all species →		Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR051336
all species →		FamilyRho GTPase-activating Guanine Nucleotide Exchange FactorsInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22826
all species →		RHO GUANINE EXCHANGE FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0007411
all species →		Biological Processaxon guidanceInterproscan
GO:0019898
all species →		Cellular Componentextrinsic component of membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0011.g208.t4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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