Gene detail

Detailed information of amic_s0011.g30.t1 in Acropora microphthalma

Genomic Location: sc0000011_pilon:315246...321029
NR annotation: XP_029206540.2, dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0011.g30.t1

CATATATTTGTTTACATCAAGACATGGAAGGATGTTCTCTGGAAAGGATTGAGGATATCCCTTGGTACCATGACCTGACCAGAAACAGTGCTGAGGTATTATTGTTGGCATATGGAAACCAAGGGAGTTATCTCATCAGACCAAGTAAAAATAATCAAGGGAATTATACTATATCAGTAAGATGCCTTGATTCTGTCAAACACTTTAAGTTAAGTTGTGATAATGGCAAACTTTTCTTTGGAGCTGGAGAATTTTCCAGTGTTGGAGAACTGCTTACCCACTTTCAGAACTACCCTATCATTGGTGGTGAAACAGGTCAACCTATTACCCTGGCATGTCCTTATTCCTGCAAAATTCCTGAGCCTCCAATATATGATGACATTAGTAAGCATGCGGTCTGTGGAAAGTCTTTTAAGTCAACGTCTCCAATTCAGTGTTCTTTGGATGAGGACCCACTGGGTCTGGAGTGGTCTATTGCATCAAAAGAAGGCTTTCTTACCAAACAAGGACGCTTTCATAAGAACTGGAAAAGACGATGGTTTGTGACAAGCAGAAACACTCTTAAATACTACAGTGAACGAGGGGATGAAAAGCCTTTAAGGGTGCTTGATCTGCGGCAGGCTCAAGATGTTTTCAAGAATAACAATTGCGGAAAAGCAAATGCCTTTAGTTTAGTCTTTCCATTTAGAACATTTTTCATGTATGCAGACTCAGAATTGGAGATGCAGGAATGGATTTCTTTGATAACATGGAAACTGGACAAAATAAGGAACATGACAGCTGTGATGTAACTGTCAGGAGAAGTATTTGCACAATTGTATAAGAATATACAATTACAGCCAGCCTCAGGGGGAATTGAAGACCAAAGCTCAAGGGAGATAATAAAAGAGGAACCTAGAATATAATAATATGGCGAAAAGAGAGAAATATTTATTGCAATTAAGTGAAAACTACAAAGTAGTAGTTTCATAAGTTAATAAATGTACTTTCTAATTTCAAAATTATTTTGAAATTAAGGAGGAGGAATCAACAGTTAAATTGCATGCAAAGGGAAGAATATTAAAATGGTGGCCATTTCAAAACCAGCGGAATGTTTTTGTGTATTTCTTAAATATTTTATCCAGTGTAACAAGAAAAAGGCATAATGAACTGATGATTTTAAAAGTATGAATTTAATTAATTTTTTTTTCTATTACAATGTACGTATTTTTCTTTTGCTTTCACAAATAACTTACCATCAGAAAAGTACATGTTCAATTGTTTAGGGTTTCTGATCTTATTGCATAAGGAGAGAGGTCGACTTGATTATTTAGTAATACTCCAAAAAATTGTTGAGTGGATTTTGCGGCTTGCATGAAATCCAAATGGTACCCAATAACAGTGACATTTAAGTTAGCTCAAAAGTCTATTTTCAAATTTCTAGAAATAAGAATAATGTGGGATTTGAGAAGACGCACCAGTTGTCATTTTCAGTTGTTTATCATCGTGTAGAAATTTGCTTAAAGCAATGTATTTACAACGTGTATTTGGAATAAAAATAGTTATTATGATAACTTGTGTTCAGATTGTTTGAATTTTCGTGACTTCACATTAATAAATACTATCTTCCCTATTTTGAAATAATTATTTTAACGACTTAACACTTCGTGAACTGTCGAttgcactatcgtgcgtataaatgttacgtcggttacgcacgtgtatttgacatgcttttagtgaataaaatactagaaatcCACCTTTATGCTGATCGCAACTTGGACCAGTTTGAACGTGCTCTTGTTAACGCATTTCTTAACGTTTTCCTTGTTGATGTTTTTGTAAGATGAAAATTGAATTGGTGTTTAACTCGTTTGCAATCTCAGTACATCACCAGAACAAGCTAATCAGACGGGGCGTCGGTCGTGGACTGCAGCGGAGGTCATCAGCAGGGTCTTTTTACATGTTTTCAACACCTTGCAAAATACTTCCCCAGGTTTCAGCACTATGGGGTCCCAAAAAGTCCTTCGGTAGTTCATCTGGCGACTTGACGAGCCGGAATTTGCCACTTAACCAAGTTTTCATGATCCGATAATGGTTTATAAAAATTTCTCTCCATAACAAGCCTTTTTGTCTGTCAAGGCTAACATTTCTATCAAGGGCGGTACACTTATTCTTCCAAAAGTCCTCCGTGTTGTAAATTTGATCGTTCCATTTTTTACAAACCTGTGATGCATCAGAGGTGCTTTTAATGTCTAAATAAGAAAAGATCTGGAACATC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P09851	Ras GTPase-activating protein 1 OS=Bos taurus OX=9913 GN=RASA1 PE=1 SV=1
P20936	Ras GTPase-activating protein 1 OS=Homo sapiens OX=9606 GN=RASA1 PE=1 SV=1
P50904	Ras GTPase-activating protein 1 OS=Rattus norvegicus OX=10116 GN=Rasa1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001890 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR051707 all species →	Family	Phosphoinositide-Interacting Signal Transduction Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14336 all species →	TANDEM PH DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for amic_s0011.g30.t1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12229	DAPP1, BAM32; dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide	-	B cell receptor signaling pathway	ko04662	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.