Gene detail

Detailed information of amic_s0012.g11.t1 in Acropora microphthalma

Genomic Location: sc0000012_pilon:219657...222595
NR annotation: XP_044176732.1, uncharacterized protein LOC114969848 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
A5D8S5	E3 ubiquitin-protein ligase SH3RF1 OS=Danio rerio OX=7955 GN=sh3rf1 PE=2 SV=2
Q28E95	E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus tropicalis OX=8364 GN=sh3rf1 PE=2 SV=1
F1QB54	Polyadenylate-binding protein 1A OS=Danio rerio OX=7955 GN=pabpc1a PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00658	PABP	Poly-adenylate binding protein, unique domain	Family	Interproscan
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR036053	Homologous_superfamily	PABC (PABP) domain	Interproscan
IPR002004	Domain	Polyadenylate-binding protein/Hyperplastic disc protein	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25464	TRIPARTITE MOTIF-CONTAINING PROTEIN 2-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan