Detailed information of amic_s0014.g124.t1 in Acropora microphthalma

Genomic Location: sc0000014_pilon:1957677...1995157
NR annotation: XP_029186916.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114954495 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
G5ECS8A disintegrin and metalloproteinase with thrombospondin motifs adt-1 OS=Caenorhabditis elegans OX=6239 GN=adt-1 PE=2 SV=1
B3EWY9Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001086 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00652
all species →		Ricin_B_lectinRicin-type beta-trefoil lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR035992
all species →		Homologous_superfamilyRicin B-like lectinsInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000772
all species →		DomainRicin B, lectin domainInterproscan
IPR052065
all species →		FamilyComplement and asymmetry regulatorInterproscan
IPR006585
all species →		DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906
all species →		PROPERDINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for amic_s0014.g124.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0014.g124.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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