Gene detail

Detailed information of amic_s0014.g183.t3 in Acropora microphthalma

Genomic Location: sc0000014_pilon:2801963...2815317
NR annotation: XP_029194608.2, uncharacterized protein LOC114960404 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0014.g183.t3

ATGTTCTGTGTGGCAGTTAGAGATGTGACTTTTCTTTCCACTTTGAGCGATTCCTTTGTTTTCGTTAAGATAATCTGGACGTTATTCTTTCATATTGGAATAACGGCTGGAAGCCATCATTTCGCGCCCAAATGTCGACCTGTTATTACTCTGGACGGCATTGTTGTATCCAGCGTTGAAAACAAAACGATGGAAAAATCATTGCTTGGTCATTACACAAACATATCTTCCTGCGAGTTGGACTGTTGTCAGAAGAGGAACTGTGATCTTGTGTTGTTTGATGGAAAATTATGTTACGGGGCATTTTGTACTCCTGAAAACACTTGTCATTTTCAGTCCGCTAAAGGCAAACAGATTTCCTATCGGGCAGTCTTCATGAATAATATTTTTAAAGAAAAAGTTACCCCAAATGTGACTGTAAACAGTTTGCAGATTACTATACCTCAATCAAATGGGATGGATTTTAGCAAAATTTACAAAGAATCAAATTTTTCGAATCACCTTATTAAATTGAAGCTAACAACGAAGAGGAAACGCTTTGATGGAGTGCGAAGTGGTAATGGAAAATTGAGAACAAATTCTACAAGACAACGCCAAAGTTGCAACATCAACAAAATTGAACAAAATGTTACATTGAACTCTGGTACGAACGCAGGAATATTCAAAATGCATGGAAAATCAAGGAACATTGATCAATGCGCAGCTCTCTGTTGTAAGGACAAGTTATGCGACTTGGCTGTTATTATGACCGGCCGCTGTTACACTGTGCAGTGTTTTAGCGAGGAAGACTGCAATTCCAGGAAGAAGATCTCATCAGATGTCATTGTTGCGTACAAGAGGCGTCATTGGAAGAATCGCACGGACGAAAAATTCCAAGAAAAAGGGAAAGGGCGTGAAAAGATAAGCAAGAAAACTGTTGTTCCTAAACCAAGTCAAGGGAATATTGGTGAGATGCTCAATTCAATTCGGTTTTTGAATGGTCCCTCAACTGTTACATCCGACATGGAGTTTACTTTTCTAAGTCAGTGCGCCTTGTATGTGGAACCAGAGAATTTTACCAAGACGATGCATGGGTGGGTAACACCACGATATACACCAGTGAAATATTTGTACCAGGCTCCTGATGGAATTCCTCCGCCTCTGGGCATGCGGTCGGCTGTTCCACTAGGAGGAATGGGTACAGGGTCACTAGAGCTCCGAGCAGACGGATCCTTTCATGAATGGACACTGGAGAACCAGTCCCCAGGTGGTTCGGTTAAACTCGGTCCAGGCGCCCTGGACAAGGCTGTATTGGGTGTACGAGTCAGCTCTCTCTTGGGAACCAAAGCTGCCATACTGCGGACACACCCTCCCCCGGGGTACCCTGGTGTTAAAAGTTTGTCATATTCGGGATTATTCCCGGTGTCAAAGCTCACTGTAAAGGACGACAGATTTTTCGGCGTTCAAATGGACCTGTTTGCCTATAGCATCCTTCATCCAAGGAAAACAGATTCTTCATTTGTCCCTGGTGTAGCTTTTACTCTTCGCGTTAAAAATCCAACCCAGAAGCCGCTCAACGTTTCATTCTTGATTAACATGCCTCTTGGCGAACAACCAGACACATCAAGAGATGGCTCAAATATTAATACAGTGGAAGACGTAGAATCATCAGCTCAATGTGCTGTCATGTGCAATGAAGACAAGCGCTGTATGGCCTGGAGTTACGAGAGAAATACCTGCTATCTAAAGGACAACATGCCACTTCATGCCTACAGAGCTGGTGTCACTTCCGGTGTGAAAGGGAGATGGCATATTAACAGCAGCGACACGCTGACTTGCAAAAGACCTGGAAACTTCCCAAACAGCGGAAGCACCACCATGATGTCAATCAATACGAACAAGCCATCATTTGCTCTATCGGATGACTTCCGGTCTGTATGGGACGCGTTCGAAGCAACCGGAAGATTGAGAAAAAGAATCGAGGATGCTGGCTTTCATGGAACGATTGCTGTCGGTGCAAAGTTGCCTGCTGGCATGAGCGAAACTTTAACTTTTATCCTGGCTTGGTATTATCCAAACAGAGATCATGCAGGCCAAAAAGTCGGTCAATTTTACAGAAAACTGTTTAACTCCAGCATAGACGTTGCCAATCATGTGCGTGACACCCTAATCACCGACTTGAGAGACATCATTTCCTGGCAGTCTAACATCGTGCCCCCAAAGTCATTTTCCGGTCTTGCGTCACAGGATCATGTCGTCGAGTCCTCTCTTCCTGATTGGCTTCAAGATCACCTAGTGAATAGCCTCAGTTTTTGGAGGAGTGGTTTCCGAGTAGCTGATGGCAGGTGGAGACAATGGGAAGCATTGGACTGCAATGACGTGGATTCAGTTCACAATGATTTTCAGCGCGAATTGCCTTATCTTTTGTTCTTTCCTGAATTGCTGAAGAATGTCGTCAGAGCCTGGGGCGAGCATCAGCACCCGGAAGGGTGGATACAGGAGACATTAGGGTTCCAATGGGGATGCCATAACCGAACAAACCGCTTAGATACCGCGGGTGGGAGGGTCATGGCGGATGTAACGCCAGCCTTTTTGGCCCAGGATCTTTGGCCAGCGGCACGCAAGGCACTGATCTGGCTCATGCGTAATAGCACTGGGGGCACGGGCCTACCATTGCGCATGACCTGCACTTATGACATCATATACCTCGAGGGATATGACTACACGACTTACAACAGCGTGATGTATCTACTTGGCCTAAAGGTTGGTAAGGTTCTGGCAGAGGCACTAGAAGAACGACAGCTGGCTTCGACAATTCAGCTTGCGCTTGACCACGCCAAAGCTAAGATTGACAGGACACTATGGACTGAGCAGGATGGTTTCTATCATGCGTGGTGGGACCATGAAAAGGGCTCACCTGATTGGCTAATGGCCGACTCCTTATATGGGCAGGTTTGGGCGTATGCCTTGGGTCTTGGCGACCTTCTCGATCCAGAAAAGATGAAAAGACATCTTCAAAAGGAACGAGAACTCAATGACACTCCATATGGTCTGCGGGTGCTCACTCAAGGTAAAACTGAGGGCCTGGTCAAGAGTATCATTCCTCGTGCGAGGCGCAAAAGAAGAATAAACGAAGCAGATGCTGTCGCTCACTTGGACAGCTTCTTTAGTGAAGTACATGGCTTGCATAAAAAGTCAAACGTACCAATGAAGCCTATGAGAATGAAAAACGTGACAAATAAGAAAAGTCTTAGAGCTCCGGCTTCTTCACTTCCACATCGTAAGCAAACGGCTTCTTCATTCGAGGAAATAGCAAGAAATCGAACGAAAGAGGATTACATGAGAAGTAGAGACTCCAATGAAACTCAAAAAAATAGCTATCAACACAGAGAGGTAATTAATAAATGGAAACAATCCACAAGAACGAAAGTGCGACCCTTAAATCAAGAATTTCTAAATCACAGAAACTGTTTTGCCCTCGAAAAGGAAAGTAAGTTCAATTCAATTTGGATGGGCAGCGATTCTGATTGGTCAACGCTCAGTATTCACCTTGGAATTGATCCAATGAAATCACTCAAGCAAGCAGAGAAGGCACTGGAGCACTACAGAACAACGCTAAATGATTTGTGGAATATCCACGGCTTGACCGCTGGCCAAGGTTATGGCGTGGATGGGCAGCCGTGGTGTACTTCTCACTACAGTTTTCATTTGGTCCTGTGGCACATTCCCCTCGCTCTTTCGGGTCAGCGGTATGATGCAGTACAACAGAAACTGACCTTTGAGCCTAAACTAAAAGTCCCGTATGCTCTTCCATTCTTTACTCCTTTTGCGAGCGGGATAATTAAAGCGAGGCAGCTCAACAGCGGTAACGTAAAGTATACAGTGACAGTGACTTCTGGTAAGCTTGATGTTAATTTGTTAGCCGTGTCGAGAAGCATGCTGCCAAGAAACAGAGTTAGCCTGGCAGGGGGTGAGTACATCAGCTGGGACATGAATTGA

Transcript

amic_s0014.g183.t3

CTTTGATCAAAACTAAAAGCCTTGTATGATTTCTTTCTCGCCCGACCAATTCCAAAGATTTTGTTTATTCAGTCGACTAAATAGTCATGTTAAATGAAATTTGGGACATTAAAAATGTTCTGTGTGGCAGTTAGAGATGTGACTTTTCTTTCCACTTTGAGCGATTCCTTTGTTTTCGTTAAGATAATCTGGACGTTATTCTTTCATATTGGAATAACGGCTGGAAGCCATCATTTCGCGCCCAAATGTCGACCTGTTATTACTCTGGACGGCATTGTTGTATCCAGCGTTGAAAACAAAACGATGGAAAAATCATTGCTTGGTCATTACACAAACATATCTTCCTGCGAGTTGGACTGTTGTCAGAAGAGGAACTGTGATCTTGTGTTGTTTGATGGAAAATTATGTTACGGGGCATTTTGTACTCCTGAAAACACTTGTCATTTTCAGTCCGCTAAAGGCAAACAGATTTCCTATCGGGCAGTCTTCATGAATAATATTTTTAAAGAAAAAGTTACCCCAAATGTGACTGTAAACAGTTTGCAGATTACTATACCTCAATCAAATGGGATGGATTTTAGCAAAATTTACAAAGAATCAAATTTTTCGAATCACCTTATTAAATTGAAGCTAACAACGAAGAGGAAACGCTTTGATGGAGTGCGAAGTGGTAATGGAAAATTGAGAACAAATTCTACAAGACAACGCCAAAGTTGCAACATCAACAAAATTGAACAAAATGTTACATTGAACTCTGGTACGAACGCAGGAATATTCAAAATGCATGGAAAATCAAGGAACATTGATCAATGCGCAGCTCTCTGTTGTAAGGACAAGTTATGCGACTTGGCTGTTATTATGACCGGCCGCTGTTACACTGTGCAGTGTTTTAGCGAGGAAGACTGCAATTCCAGGAAGAAGATCTCATCAGATGTCATTGTTGCGTACAAGAGGCGTCATTGGAAGAATCGCACGGACGAAAAATTCCAAGAAAAAGGGAAAGGGCGTGAAAAGATAAGCAAGAAAACTGTTGTTCCTAAACCAAGTCAAGGGAATATTGGTGAGATGCTCAATTCAATTCGGTTTTTGAATGGTCCCTCAACTGTTACATCCGACATGGAGTTTACTTTTCTAAGTCAGTGCGCCTTGTATGTGGAACCAGAGAATTTTACCAAGACGATGCATGGGTGGGTAACACCACGATATACACCAGTGAAATATTTGTACCAGGCTCCTGATGGAATTCCTCCGCCTCTGGGCATGCGGTCGGCTGTTCCACTAGGAGGAATGGGTACAGGGTCACTAGAGCTCCGAGCAGACGGATCCTTTCATGAATGGACACTGGAGAACCAGTCCCCAGGTGGTTCGGTTAAACTCGGTCCAGGCGCCCTGGACAAGGCTGTATTGGGTGTACGAGTCAGCTCTCTCTTGGGAACCAAAGCTGCCATACTGCGGACACACCCTCCCCCGGGGTACCCTGGTGTTAAAAGTTTGTCATATTCGGGATTATTCCCGGTGTCAAAGCTCACTGTAAAGGACGACAGATTTTTCGGCGTTCAAATGGACCTGTTTGCCTATAGCATCCTTCATCCAAGGAAAACAGATTCTTCATTTGTCCCTGGTGTAGCTTTTACTCTTCGCGTTAAAAATCCAACCCAGAAGCCGCTCAACGTTTCATTCTTGATTAACATGCCTCTTGGCGAACAACCAGACACATCAAGAGATGGCTCAAATATTAATACAGTGGAAGACGTAGAATCATCAGCTCAATGTGCTGTCATGTGCAATGAAGACAAGCGCTGTATGGCCTGGAGTTACGAGAGAAATACCTGCTATCTAAAGGACAACATGCCACTTCATGCCTACAGAGCTGGTGTCACTTCCGGTGTGAAAGGGAGATGGCATATTAACAGCAGCGACACGCTGACTTGCAAAAGACCTGGAAACTTCCCAAACAGCGGAAGCACCACCATGATGTCAATCAATACGAACAAGCCATCATTTGCTCTATCGGATGACTTCCGGTCTGTATGGGACGCGTTCGAAGCAACCGGAAGATTGAGAAAAAGAATCGAGGATGCTGGCTTTCATGGAACGATTGCTGTCGGTGCAAAGTTGCCTGCTGGCATGAGCGAAACTTTAACTTTTATCCTGGCTTGGTATTATCCAAACAGAGATCATGCAGGCCAAAAAGTCGGTCAATTTTACAGAAAACTGTTTAACTCCAGCATAGACGTTGCCAATCATGTGCGTGACACCCTAATCACCGACTTGAGAGACATCATTTCCTGGCAGTCTAACATCGTGCCCCCAAAGTCATTTTCCGGTCTTGCGTCACAGGATCATGTCGTCGAGTCCTCTCTTCCTGATTGGCTTCAAGATCACCTAGTGAATAGCCTCAGTTTTTGGAGGAGTGGTTTCCGAGTAGCTGATGGCAGGTGGAGACAATGGGAAGCATTGGACTGCAATGACGTGGATTCAGTTCACAATGATTTTCAGCGCGAATTGCCTTATCTTTTGTTCTTTCCTGAATTGCTGAAGAATGTCGTCAGAGCCTGGGGCGAGCATCAGCACCCGGAAGGGTGGATACAGGAGACATTAGGGTTCCAATGGGGATGCCATAACCGAACAAACCGCTTAGATACCGCGGGTGGGAGGGTCATGGCGGATGTAACGCCAGCCTTTTTGGCCCAGGATCTTTGGCCAGCGGCACGCAAGGCACTGATCTGGCTCATGCGTAATAGCACTGGGGGCACGGGCCTACCATTGCGCATGACCTGCACTTATGACATCATATACCTCGAGGGATATGACTACACGACTTACAACAGCGTGATGTATCTACTTGGCCTAAAGGTTGGTAAGGTTCTGGCAGAGGCACTAGAAGAACGACAGCTGGCTTCGACAATTCAGCTTGCGCTTGACCACGCCAAAGCTAAGATTGACAGGACACTATGGACTGAGCAGGATGGTTTCTATCATGCGTGGTGGGACCATGAAAAGGGCTCACCTGATTGGCTAATGGCCGACTCCTTATATGGGCAGGTTTGGGCGTATGCCTTGGGTCTTGGCGACCTTCTCGATCCAGAAAAGATGAAAAGACATCTTCAAAAGGAACGAGAACTCAATGACACTCCATATGGTCTGCGGGTGCTCACTCAAGGTAAAACTGAGGGCCTGGTCAAGAGTATCATTCCTCGTGCGAGGCGCAAAAGAAGAATAAACGAAGCAGATGCTGTCGCTCACTTGGACAGCTTCTTTAGTGAAGTACATGGCTTGCATAAAAAGTCAAACGTACCAATGAAGCCTATGAGAATGAAAAACGTGACAAATAAGAAAAGTCTTAGAGCTCCGGCTTCTTCACTTCCACATCGTAAGCAAACGGCTTCTTCATTCGAGGAAATAGCAAGAAATCGAACGAAAGAGGATTACATGAGAAGTAGAGACTCCAATGAAACTCAAAAAAATAGCTATCAACACAGAGAGGTAATTAATAAATGGAAACAATCCACAAGAACGAAAGTGCGACCCTTAAATCAAGAATTTCTAAATCACAGAAACTGTTTTGCCCTCGAAAAGGAAAGTAAGTTCAATTCAATTTGGATGGGCAGCGATTCTGATTGGTCAACGCTCAGTATTCACCTTGGAATTGATCCAATGAAATCACTCAAGCAAGCAGAGAAGGCACTGGAGCACTACAGAACAACGCTAAATGATTTGTGGAATATCCACGGCTTGACCGCTGGCCAAGGTTATGGCGTGGATGGGCAGCCGTGGTGTACTTCTCACTACAGTTTTCATTTGGTCCTGTGGCACATTCCCCTCGCTCTTTCGGGTCAGCGGTATGATGCAGTACAACAGAAACTGACCTTTGAGCCTAAACTAAAAGTCCCGTATGCTCTTCCATTCTTTACTCCTTTTGCGAGCGGGATAATTAAAGCGAGGCAGCTCAACAGCGGTAACGTAAAGTATACAGTGACAGTGACTTCTGGTAAGCTTGATGTTAATTTGTTAGCCGTGTCGAGAAGCATGCTGCCAAGAAACAGAGTTAGCCTGGCAGGGGGTGAGTACATCAGCTGGGACATGAATTGATTTAATACACGCTTTTTATCTTGTATTCATACTGATATGTTGGCCGAGGAAGCCGATGCGCCAACCGGAAATATTGAACAAACGATCACCAATTCTTTATCGTTATATTTCATTACAATACAAGCTATCGTTGATCAAAACTAAGTTAAAAAGTCATTTTAAAATATACTACGATAGACTGCTCTGGTTTGTGCGGCTTTAGTTTCGCAAAATTTGAACTTCAGGATCAAGTCACATTTATCACACGTGATTTTTTTTTAATTCTAATAACTGGGGGGTATTTGCCATCTTTTTCTGCCTACGGATGCATGTGTCTTTTCCTTTCCGTTAACTCTAATTTATCAAAAGATATTTGTACAAAAATATACGGCTTATGAGACTTTTAAGTGAATTGAACTGCCTACTTGCCCGAGACAATAAAAATTTTGCTTTTGGGAAttaagatgatttccgcacaacattcgagcgataatggcaaaaattggcaaaaattaagttaccaaaaaatcctcttagcatggtaatattttgaataaaggtaagaagattct

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001205 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12215 all species →	Glyco_hydr_116N	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term	Family	Interproscan
PF04685 all species →	DUF608	Glycosyl-hydrolase family 116, catalytic region	Repeat	Interproscan
PF00024 all species →	PAN_1	PAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000177 all species →	Domain	Apple domain	Interproscan
IPR024462 all species →	Domain	Glycosyl-hydrolase family 116, N-terminal	Interproscan
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR006775 all species →	Domain	Glycosyl-hydrolase family 116, catalytic region	Interproscan
IPR052566 all species →	Family	Non-lysosomal glucosylceramidase	Interproscan
IPR003609 all species →	Domain	PAN/Apple domain	Interproscan
IPR008928 all species →	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12654 all species →	BILE ACID BETA-GLUCOSIDASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0008422 all species →	Molecular Function	beta-glucosidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0014.g183.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.