Detailed information of amic_s0014.g92.t1 in Acropora microphthalma

Genomic Location: sc0000014_pilon:1382134...1386188
NR annotation: XP_044174962.1, contactin-associated protein-like 4 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000058 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01410
all species →		COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050372
all species →		FamilyNeurexin-related cell adhesion and synaptic proteinInterproscan
IPR000885
all species →		DomainFibrillar collagen, C-terminalInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR036056
all species →		Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR002181
all species →		DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15036
all species →		PIKACHURIN-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005201
all species →		Molecular Functionextracellular matrix structural constituentInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0014.g92.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP