Gene detail

Detailed information of amic_s0015.g113.t1 in Acropora microphthalma

Genomic Location: sc0000015_pilon:1824935...1858167
NR annotation: XP_029188502.2, phosphatidylinositide phosphatase SAC2-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0015.g113.t1

ATGGAACTCTTTCAATCTCAGGACAACTTCATAATTGTCAATGGAACCCATAGTTTATGGTGCAACCGGCAAGATGGACGTCTGCAAGCACGCATTGGAGTTGATCTCGGTGAAGCATGGTCGTTGAGATGTCGAGGGATCGTGTACGGCATCATCGGAAAAATTCAGTTTTTTCCAGGTGCAGACTGGAGACTTCTGGTGATTTCCAAAAGGACACTCCTTGGCAATCTACCTGGGGGACATGAAGTTTATAGGATTGACAGGGTTGCTGTATTGACCCTGTCTGCCAATGAATCACCTGAATTTGAGCTGGATCTTTGTGAACTTCACCAAAAAGGAGGTGGTGTGGGAGGGATAGAGAATCAGCAAAGAGGCCTGGGACAGACTTGGAGCAAAATAAAAACTGCTGCTTCTACATTGAAAGAAAAGGATGATGGAGACGAAGACGAGGACAAGAAAGTTGTACCATTCCCACCTGAAGAGTTTGATTTAGTTCTTGTATCCAGGAGGAGTCTAAATCGAGCTGGGACTCGATACAGAAGACGTGGTGTTGATGATGACGGAGATGTTGCGAATTACGTTGAAACAGAACAGATCATATGCACCTCGACACACAATGTGTCCTTTGTACAAGTGAGGGGATCCGTCCCTGTTTATTGGAGTCAACCAGGCTACAAATACCGACCACCTCCCAGAATAGACAGAGGGCCAGAGGAAAACCAGGCAGCTTTTAGGAAACATTTTGATCACCAGTTAGAACTTTATAAAAATGTGGCTGTTATAAATTTAGTGGATCAAACAGGAAGAGAGAAGATAATAAGCGATGTTTTCTTGGAAAACGTCTTGGCGTATAACAGTCCATTCCTAACTTATATCACCTTTGATTTTCATGAGTATTGTCGTGGAATGAGATTTGAAAATGTCTCTGTGCTAGTGGAAAGCATCTTAGAAGTCATCAAGGAAGTTCGTCATTGTTGGACGGATGCCAAAGGAATCATCTGTGACCAGCGCGGTGTTTTCCGCGTGAATTGTATGGATTGTCTGGACAGAACAAACGTTGTACAAGCGGCATTGGCGCGGCACATCATGGAACAACAACTGAAGAAGTTGGGCAAACAGCTTCCAGATCAAATCCTCCCTGCGCCTATCAGGACAGCTTTTCAGGAAATGTGGGCCAGCAATGGCGACGCCATCAGTCGCCAGTATGCGGGAACTGCAGCCATGAAGGGAGACTTTACTAGAACAGGAGAAAGGCGATTTACTGGTGTGATGAAAGATGGATACAACTCTGCCAACAGATATTACCTGAACAGATTCAAAGCTGCATATAGGCAAACGCTCATCGATGTTATGCTTGGTAACCCTATGACAGAAGACATTGCGGCTCTGATCGCCGCTATGAAGAACGGACCAGAGGAAGAGCAGTGGACAATGGAGAGAGAAGAGTGCGTAGCGCAGCTTGTACAACACTGTAAGCAGCTGCTACTCACCGATGAAGAGGAGTGCATATGTGGATGGGCGTTGGTTGACCCCTTCTACAGTACTGACGGTGGGGAAGTCACTCAAGATCAAGATGTGATTCTGTTGCTGACGTATCATGCTTATTACGTAGCGAGTTATGATGACGAAGCCGAAAGAATAACTCAGTATGAACGCATCGTGCTTGAAGACTTGGAAAAGATTGAAATCGGTTTTGAAACGAGTTTCAAGGCCAGGCATCTGTTTATCCGGATACATCGGCGTCACCAGGGAATCACGGGATATTTCCACACGCTAAGGACGATACAACACCGGACGGGAGACGACGCGAGAAGTGTCCTTCTTTGCATTGCGGACGCTTTCGCCTCAGCGCGAGCATCGTTAGAGCTGGGATTGAAAGTTGTGGAGTGTCGTCTGGACAGAAAGAAAAGCAAGACTCCTCCCAGTTTGATTCAAATTTCATCTAAGTCTCGACTCAACAGTTGGTCCAAGCCTTCCTGTCGGCCAAAAAGCAACTCTGCCACTGAGGGCACCGCCAACGACTCCTCCCTAAGTGCTTTGCATCGCTCCAGACTCCGCTCTCTTCCAACCTCCCTCTCGGATTCGTGTCTGGCCGAGAGACGCTTGGAAGATTTAGAGGATTTGAAAGTCTCTGTTGCCAGTGCTCCGCAGAGTTCTGGTAGCTCGGGGTATGATGACGACGAAGATGATTCTGAAATGGTGTTCTCTGAACTTCATGGGACCCATCGTGACACAGAGCTGGAATCAACGGAAAATGGATGCTTGGGCACTGAAGGGGAAGCTCATTTTGAAGGTAAAACTGTGAATGATCAGTCGGGGAATAGGAATTTTGATTTAAGTTTGTTAGAGGGGGGACTTCTTTCAGAAGATGAATTTTTCAAGCACAGAGGATTTGTGGTAGGTGATGAACAGTTAATTAACCTAGAAGAAGGAGATGACGGCCATCGAGACAAAACTGCCAGGAAAGGAAATATATCAAGGGAAATGACTCAAGAAAATAATGGTTGTGGTCAGCTGGGTGGTGAAGACTTCAAGGAAGAAGGATTTGAGGCAGGCAACGAACAGTTAATTAGTTTTGAAGAAGACGACGACGACGAGAGCCAACGACTCAGACCTACCGAAAGAGGAAATGGTTTGAGGGAAGTGACTCAAGAAAATGTTTTGTATGATCAGTTGAAATTGGAATCGAGTGATGAAAATGGGTCAGAAATCAATGGAAGTAAGGGAACAAATGCTGACGAAGGTCACGAGATTACGAGTGAGTTTTATGTAGGCGAAGTAACACGTGACAAAATGCCTGGAATTAGGCAGGAAAAGGGCCAAGAGGAAGATTTCAGTGCGTCACGCCAGGAAAGCAAGTCGCACATTTACCTGCGCAATGGTGAGGTAAACTCTGGTGAACGCAGAATGAGCAAGGGGAGCAAAGAGGAAGGTCAACAGATAAGCTTCGAGGGCTCATCGGGGACAATGAGGGTCAGTTATTCCAGCGTAGAGCTTGGCTCAATAGCGGATTCCTCGTTAAATGCCACCAACAAACGAGACAAAAGTCCCGAAAGAAGACGATTTACTGGCCGGTTTTCCGGAAACCGAGGGCTGAAAATATTCGCTAACGCGCAAGCGCGTGGACGTACTCTCATTCCAGAACTGCGCAGCAAGCTCACGTCATTTTCGCAACAAGTTCGTTCGCGTTCACCACGCATGCGCCCAACTCTACCAAATGAGCAGACCAGCGAGCAGAAAATGCTTAGGAGAAAGTGTCGCACGAAAATTATTGAATTATGA

Transcript

amic_s0015.g113.t1

TCTACTGAAGAGAATCAAATATTATATCGTAATGATCACCGGAGTTGGTTAGAAATGGAACTCTTTCAATCTCAGGACAACTTCATAATTGTCAATGGAACCCATAGTTTATGGTGCAACCGGCAAGATGGACGTCTGCAAGCACGCATTGGAGTTGATCTCGGTGAAGCATGGTCGTTGAGATGTCGAGGGATCGTGTACGGCATCATCGGAAAAATTCAGTTTTTTCCAGGTGCAGACTGGAGACTTCTGGTGATTTCCAAAAGGACACTCCTTGGCAATCTACCTGGGGGACATGAAGTTTATAGGATTGACAGGGTTGCTGTATTGACCCTGTCTGCCAATGAATCACCTGAATTTGAGCTGGATCTTTGTGAACTTCACCAAAAAGGAGGTGGTGTGGGAGGGATAGAGAATCAGCAAAGAGGCCTGGGACAGACTTGGAGCAAAATAAAAACTGCTGCTTCTACATTGAAAGAAAAGGATGATGGAGACGAAGACGAGGACAAGAAAGTTGTACCATTCCCACCTGAAGAGTTTGATTTAGTTCTTGTATCCAGGAGGAGTCTAAATCGAGCTGGGACTCGATACAGAAGACGTGGTGTTGATGATGACGGAGATGTTGCGAATTACGTTGAAACAGAACAGATCATATGCACCTCGACACACAATGTGTCCTTTGTACAAGTGAGGGGATCCGTCCCTGTTTATTGGAGTCAACCAGGCTACAAATACCGACCACCTCCCAGAATAGACAGAGGGCCAGAGGAAAACCAGGCAGCTTTTAGGAAACATTTTGATCACCAGTTAGAACTTTATAAAAATGTGGCTGTTATAAATTTAGTGGATCAAACAGGAAGAGAGAAGATAATAAGCGATGTTTTCTTGGAAAACGTCTTGGCGTATAACAGTCCATTCCTAACTTATATCACCTTTGATTTTCATGAGTATTGTCGTGGAATGAGATTTGAAAATGTCTCTGTGCTAGTGGAAAGCATCTTAGAAGTCATCAAGGAAGTTCGTCATTGTTGGACGGATGCCAAAGGAATCATCTGTGACCAGCGCGGTGTTTTCCGCGTGAATTGTATGGATTGTCTGGACAGAACAAACGTTGTACAAGCGGCATTGGCGCGGCACATCATGGAACAACAACTGAAGAAGTTGGGCAAACAGCTTCCAGATCAAATCCTCCCTGCGCCTATCAGGACAGCTTTTCAGGAAATGTGGGCCAGCAATGGCGACGCCATCAGTCGCCAGTATGCGGGAACTGCAGCCATGAAGGGAGACTTTACTAGAACAGGAGAAAGGCGATTTACTGGTGTGATGAAAGATGGATACAACTCTGCCAACAGATATTACCTGAACAGATTCAAAGCTGCATATAGGCAAACGCTCATCGATGTTATGCTTGGTAACCCTATGACAGAAGACATTGCGGCTCTGATCGCCGCTATGAAGAACGGACCAGAGGAAGAGCAGTGGACAATGGAGAGAGAAGAGTGCGTAGCGCAGCTTGTACAACACTGTAAGCAGCTGCTACTCACCGATGAAGAGGAGTGCATATGTGGATGGGCGTTGGTTGACCCCTTCTACAGTACTGACGGTGGGGAAGTCACTCAAGATCAAGATGTGATTCTGTTGCTGACGTATCATGCTTATTACGTAGCGAGTTATGATGACGAAGCCGAAAGAATAACTCAGTATGAACGCATCGTGCTTGAAGACTTGGAAAAGATTGAAATCGGTTTTGAAACGAGTTTCAAGGCCAGGCATCTGTTTATCCGGATACATCGGCGTCACCAGGGAATCACGGGATATTTCCACACGCTAAGGACGATACAACACCGGACGGGAGACGACGCGAGAAGTGTCCTTCTTTGCATTGCGGACGCTTTCGCCTCAGCGCGAGCATCGTTAGAGCTGGGATTGAAAGTTGTGGAGTGTCGTCTGGACAGAAAGAAAAGCAAGACTCCTCCCAGTTTGATTCAAATTTCATCTAAGTCTCGACTCAACAGTTGGTCCAAGCCTTCCTGTCGGCCAAAAAGCAACTCTGCCACTGAGGGCACCGCCAACGACTCCTCCCTAAGTGCTTTGCATCGCTCCAGACTCCGCTCTCTTCCAACCTCCCTCTCGGATTCGTGTCTGGCCGAGAGACGCTTGGAAGATTTAGAGGATTTGAAAGTCTCTGTTGCCAGTGCTCCGCAGAGTTCTGGTAGCTCGGGGTATGATGACGACGAAGATGATTCTGAAATGGTGTTCTCTGAACTTCATGGGACCCATCGTGACACAGAGCTGGAATCAACGGAAAATGGATGCTTGGGCACTGAAGGGGAAGCTCATTTTGAAGGTAAAACTGTGAATGATCAGTCGGGGAATAGGAATTTTGATTTAAGTTTGTTAGAGGGGGGACTTCTTTCAGAAGATGAATTTTTCAAGCACAGAGGATTTGTGGTAGGTGATGAACAGTTAATTAACCTAGAAGAAGGAGATGACGGCCATCGAGACAAAACTGCCAGGAAAGGAAATATATCAAGGGAAATGACTCAAGAAAATAATGGTTGTGGTCAGCTGGGTGGTGAAGACTTCAAGGAAGAAGGATTTGAGGCAGGCAACGAACAGTTAATTAGTTTTGAAGAAGACGACGACGACGAGAGCCAACGACTCAGACCTACCGAAAGAGGAAATGGTTTGAGGGAAGTGACTCAAGAAAATGTTTTGTATGATCAGTTGAAATTGGAATCGAGTGATGAAAATGGGTCAGAAATCAATGGAAGTAAGGGAACAAATGCTGACGAAGGTCACGAGATTACGAGTGAGTTTTATGTAGGCGAAGTAACACGTGACAAAATGCCTGGAATTAGGCAGGAAAAGGGCCAAGAGGAAGATTTCAGTGCGTCACGCCAGGAAAGCAAGTCGCACATTTACCTGCGCAATGGTGAGGTAAACTCTGGTGAACGCAGAATGAGCAAGGGGAGCAAAGAGGAAGGTCAACAGATAAGCTTCGAGGGCTCATCGGGGACAATGAGGGTCAGTTATTCCAGCGTAGAGCTTGGCTCAATAGCGGATTCCTCGTTAAATGCCACCAACAAACGAGACAAAAGTCCCGAAAGAAGACGATTTACTGGCCGGTTTTCCGGAAACCGAGGGCTGAAAATATTCGCTAACGCGCAAGCGCGTGGACGTACTCTCATTCCAGAACTGCGCAGCAAGCTCACGTCATTTTCGCAACAAGTTCGTTCGCGTTCACCACGCATGCGCCCAACTCTACCAAATGAGCAGACCAGCGAGCAGAAAATGCTTAGGAGAAAGTGTCGCACGAAAATTATTGAATTATGATAAATGCCAGCGATGCTTGTGGAGATGATGTTCCGTTTGAATCGAACATCTTCGGTGGATTGGGTTTTCTCGTGCTCTATTTAGAGAGAGAGGTTTTTGGTTGGGCTCCAGCTGGGTTAAAATGGTTGTACACGATGGATATAGGCGAATATGTAAACGAGTTTACTCAAAGAAAGGAACCATGATAATAACAAATTGAGGCCGAAAGTTAAAGACCGCCCCTTACGTCTAGAAATGCTCGAAATTGGATGCATGCTCTCGCTCagtctaagctacgtcaaccatgactttgaacgttttcggcgtttgtgtctgtgtctatttttaagtttggcttggcgttactgtgtgtctatgaggagttaagttaggaggacactttatgacctttacttcttgccagaggtgatggtcaatttaacagtgtgcaaggtgcatgacgctaagtctgcatggatctaattacgtgcattactagacGTGTCCGGCAATTTTAAGATTTTTGGCTTTAATAATGTGCAAATGCTTGCACTTAAAAAGATGTCAATATTTGGGAGACAAAAGTGCTGTTTAGCTCACTCATTCTTTGTAACAACTGCCAATTTTTTTAAGTTTTATTTTTACTCAATTGTCAGCTCGCAGGAAAACGCCCGTAACTTTCACTTTCATTTTTCGTGGCTCTTAATGCTTGATTAAGTCTGGTAGCGACTATTCCCAGAAACTTTTGCATTTTCTACCGtaatatcacagagggcaaattactgaatgtcgatcaagagcgtatcttctcttaatttttcttgtgaaaagggcaaaattacttgctcgcaattagccctcgggccaatcgctgtcgagaagtccttaaaaaattttatgtaacattggcgtctcatttcgagatagtggacgaggaatatatcgaagaattaagaggcgagcgaaaataaaaacatatataaaagagcactaaaagaacgctttcaaaaagtgggcgaatgaaagaaaattccaagcaaatttcgaagagtacgagagcggtgtcctctaccaaatgctgttgtaattttatacattcagaaattcgttaattttgacctctgtgttatttacaagtaatgataatggctcccggtaaaagtaaggattaaatatcagttgtgttA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2H2	Phosphatidylinositide phosphatase SAC2 OS=Homo sapiens OX=9606 GN=INPP5F PE=1 SV=3
Q8CDA1	Phosphatidylinositide phosphatase SAC2 OS=Mus musculus OX=10090 GN=Inpp5f PE=1 SV=1
A8E7C5	Phosphatidylinositide phosphatase SAC2 OS=Danio rerio OX=7955 GN=inpp5f PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004344 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12456 all species →	hSac2	Inositol phosphatase	Domain	Interproscan
PF02383 all species →	Syja_N	SacI homology domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022158 all species →	Domain	Inositol phosphatase	Interproscan
IPR002013 all species →	Domain	SAC domain	Interproscan
IPR034753 all species →	Domain	hSac2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45662 all species →	PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016791 all species →	Molecular Function	phosphatase activity	Interproscan
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0043812 all species →	Molecular Function	phosphatidylinositol-4-phosphate phosphatase activity	Interproscan
GO:0045334 all species →	Cellular Component	clathrin-coated endocytic vesicle	Interproscan
GO:0046856 all species →	Biological Process	phosphatidylinositol dephosphorylation	Interproscan
GO:2001135 all species →	Biological Process	regulation of endocytic recycling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21798	SAC2, INPP5F; phosphatidylinositol 4-phosphatase	EC:3.1.3.-	Phosphatidylinositol signaling system	ko04070	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.