Gene detail

Detailed information of amic_s0015.g24.t1 in Acropora microphthalma

Genomic Location: sc0000015_pilon:425315...433860
NR annotation: XP_029200883.2, LOW QUALITY PROTEIN: ceramide kinase-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0015.g24.t1

NNNNNNNNAGAACAAGGAAGCACAAATGGAGGGAGAAAATGATTGTTTTTGATTGCGATGATGCAGTTTTGTGCGAAGAATGGTTGCATGCAATCCAAACTGTACTATCAGGTTTTAACCGACCCAAAAGACTTCTTGTATTCATCAATCCTGTCGGAGGAAGAAGACTTGGCCATAAAATATATGTGGAACAAGTACAGCCACTGTTTGAGTTGGCAAATATAAAAGTCGATATGATTGTTACTCAGAAAGCAAACCATGCTAGAGATTACCTGATGGAAGAAGGCTTGGAGAAGGTTGACGGAGTGGTCTCTGTGGGTGGAGATGGCATGTTCCATGAAGTTCTTAACGGTCTTTTGATGAGAGCCCAACAGGAAGCCATGTTGAATTCATCATCGCAAGATTTTCAACCAGTGCCTCTCAATATTCCCATCGGAATTATTCCAGCAGGTTCCACAGATGCAATTGCTTTCTGTACAACAGGGAACAATGACCCAGTCACCTCAGCTCTTCACATTATATTAGGTGACAGGCAACCCCTGGATGTTTGTTGCGTCCGACGAAAGAATGAAGTTCTCCGCTACAGCGTTGTCATGGCAGCCTATGGATTTTTTGGTGACGTCATGCAAGACAGCGAGAAGCTTCGTTGGATGGGACCCAAGAGATATGATGTTGCCGGTTTTAAGAAATTTATGACCAACAGAGGATACGAAGGAGTTGTGTCGTATCTCCCCGTAGAAACTGTAGATACGAGTCCACAAGATAGCTTGAGATGTCGGTCAGGGTGCAATATCTGCAAGAGTAGTTTTAACACGGTCCAACAGAGACCCTCTCAACAGAACAGTTCAGTACCTGAGGCACATGCTTAGAATTACATCAAAAGCCGATCAATTCAATTTTGATTTCGTGGAAGTGCACCGCGTGAGCGAGTTTTCCTTCCGACCGCTGGGCGAAGAGAGTGAGCCCGTGGATGAAGCTGACGGTAGAGAAAAGTCTGGAACGAAAGAAGGTGACAAGGAGTATCTGGCGGAAAAAATTACGTCATCAGCTCCCCGACTTGGCCCCAGGAGTGTTTGGAACGTGGACGGAGAACTGATCACTCATCCCGCGATTGACGTCAAGGTACATCGTCAGCTAATTCGCCTGTTTGCTCGTGGGATAGAAGAATGCGAAGACACTCCATCTTGTACAGTCTGTAGAAGGCGTTAGCATTTAACCTGATTAGTTAGCTCTGTTTTGAAATTATTCTTAATGCTAGCGAATGAAATTTGTTCCTCTAAAATTACAGTCGTAGTACGGGCGATTTACAGAGGCTAAACAAAATCTTTACCCTTGAAACAAGGAAAAGAAAGCCTTAAAATCACAAATGTTGTTTATACAAACTTACCAAATTATGAAAAGTGAAATTATCGTCAGCGCTCGACATTGCTCGTCCCATCTCATAGACCATGATATACCGTCAGATTTCTCGTCAAAAATTCAAGGGTTGCGCATGTCAAACGCATGAGTCTGCTGGTCAGACTGCGTGACAATGTTTCTAAATCTTTTCTAAATCTAAagctttctaaatctttaacggtggtaattcaacctttgtcaactcttttgataaaaccaaatttttgCGTGACAGTATGCTCGACCATTAGTCTGTTAATCCGAGGCGATTAGTTCAGCAGACGATAACGCTCGTTGTCTCTCGGATAGTCTGTTGTTACCGATTCCAAGATAAGAAACTGCGCATGCCAAACACACAAGCTTGCTGGTCAGGTTGTGTATGGCTCACCCTGTGATCAACTGGTTCTGTAGGCGAGACTGATGGACCGACAAGGGGGGCGTGGGGAATATTCCGAAAATATGTCATGTAATTTAGCTGAAAAGTCGAACGTGATTTTGATCTCAGACATGGTTTCAATGAGTGCTTGTCAAAAAGTTACGATACAGTACCCCTAAGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTACTCTATTTGTTCCATTCCTTGCTTTTTGACGCTAGTTTAACCAGAAATACAGTCGAAATTTAAACAACAGAAAGGCAGGTTTCATCCATAAATCCATACTTTTAGTGTGCAGCGCTTGTCAGAATGATATATTGTAAAAATAGAGTTCGCTTAAGAATATTTAATTTGGTGTTACGAAATGTGATTTTGAAATGTAATAGGACAGTAAAATCGTTTTATTTCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8TCT0	Ceramide kinase OS=Homo sapiens OX=9606 GN=CERK PE=1 SV=1
Q8K4Q7	Ceramide kinase OS=Mus musculus OX=10090 GN=Cerk PE=1 SV=2
C0LT23	Ceramide kinase OS=Oryza sativa subsp. japonica OX=39947 GN=CERK PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001782 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00781 all species →	DAGK_cat	Diacylglycerol kinase catalytic domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001206 all species →	Domain	Diacylglycerol kinase, catalytic domain	Interproscan
IPR017438 all species →	Homologous_superfamily	Inorganic polyphosphate/ATP-NAD kinase, N-terminal	Interproscan
IPR016064 all species →	Homologous_superfamily	NAD kinase/diacylglycerol kinase-like domain superfamily	Interproscan
IPR050187 all species →	Family	Lipid Phosphate Formation and Regulation	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12358 all species →	SPHINGOSINE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0001727 all species →	Molecular Function	lipid kinase activity	Interproscan
GO:0001729 all species →	Molecular Function	ceramide kinase activity	Interproscan
GO:0006665 all species →	Biological Process	sphingolipid metabolic process	Interproscan
GO:0006672 all species →	Biological Process	ceramide metabolic process	Interproscan
GO:0016310 all species →	Biological Process	phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0015.g24.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.