Detailed information of amic_s0015.g76.t2 in Acropora microphthalma

Genomic Location: sc0000015_pilon:1186682...1195114
NR annotation: XP_015762587.1, PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P50416Carnitine O-palmitoyltransferase 1, liver isoform OS=Homo sapiens OX=9606 GN=CPT1A PE=1 SV=2
P32198Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2
P97742Carnitine O-palmitoyltransferase 1, liver isoform OS=Mus musculus OX=10090 GN=Cpt1a PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001543 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00755
all species →		Carn_acyltransfCholine/Carnitine o-acyltransferaseFamilyInterproscan
PF16484
all species →		CPT_NCarnitine O-palmitoyltransferase N-terminusDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000542
all species →		FamilyAcyltransferase ChoActase/COT/CPTInterproscan
IPR039551
all species →		DomainCholine/carnitine acyltransferase domainInterproscan
IPR042231
all species →		Homologous_superfamilyCholine/Carnitine o-acyltransferase, domain 2Interproscan
IPR032476
all species →		DomainCarnitine O-palmitoyltransferase, N-terminalInterproscan
IPR042572
all species →		Homologous_superfamilyCarnitine o-acyltransferase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22589
all species →		CARNITINE O-ACYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004095
all species →		Molecular Functioncarnitine O-palmitoyltransferase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006631
all species →		Biological Processfatty acid metabolic processInterproscan
GO:0009437
all species →		Biological Processcarnitine metabolic processInterproscan
GO:0016746
all species →		Molecular Functionacyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0015.g76.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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