Detailed information of amic_s0016.g24.t1 in Acropora microphthalma

Genomic Location: sc0000016_pilon:409494...415995
NR annotation: XP_029208476.2, uncharacterized protein LOC114972105 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000166 (this species only)
Ubiquitin familyE3|E3 activity|HECT · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632
all species →		HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF02845
all species →		CUECUE domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000569
all species →		DomainHECT domainInterproscan
IPR035983
all species →		Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR003892
all species →		DomainUbiquitin system component CUEInterproscan

 PANTHER
No PANTHER signature was detected for amic_s0016.g24.t1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0043130
all species →		Molecular Functionubiquitin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0016.g24.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP