Detailed information of amic_s0016.g57.t1 in Acropora microphthalma

Genomic Location: sc0000016_pilon:1126804...1136246
NR annotation: XP_029205864.2, WD repeat-containing protein 55-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1L112WD repeat-containing protein 55 OS=Rattus norvegicus OX=10116 GN=Wdr55 PE=2 SV=1
Q9H6Y2WD repeat-containing protein 55 OS=Homo sapiens OX=9606 GN=WDR55 PE=1 SV=2
Q5R9T6WD repeat-containing protein 55 OS=Pongo abelii OX=9601 GN=WDR55 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005218 (this species only) · gene tree & orthology
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan
PF12894
all species →		ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050505
all species →		FamilyWD repeat-containing protein WDR55/POC1Interproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR019775
all species →		Conserved_siteWD40 repeat, conserved siteInterproscan
IPR024977
all species →		DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44019
all species →		WD REPEAT-CONTAINING PROTEIN 55Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24750WDR55, JIP5; WD repeat-containing protein 55-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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