Gene detail

Detailed information of amic_s0016.g88.t1 in Acropora microphthalma

Genomic Location: sc0000016_pilon:1715419...1726107
NR annotation: XP_029204469.1, casein kinase I-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0016.g88.t1

GCTAAACGATTAAATGAAGTTTTCCCAATGACATAGAGCGAAACATAGAAGTTCCGCAAAGATCTTTGTGAAATCTAGCCATCGTTCATGGAAGATGGTGTAATTAATCGTAGGGATCCTCTTTATTGGTAAAGGAGTTTTCCATTTCTACGATCGACTGGTATCAAGCGCTGGGAAGGAGTTATTTGAGGACATTTCTTTCGTTAATTTCTTCTTATGACTGAGGAGAGGAACGCTTGACAAACTCCATTTGGATTTGTCGTGTATCGTTTGTTCGTTGGAGTCAAGATGGAATTACGCGTTGGAAACAAGTACCGCCTGGGTAGGAAGATTGGAAGTGGATCTTTCGGAGACATTTATCTAGGAACGAACATTTCAACTGGCGAGGAGGTTGCTATTAAATTAGAATGTGTCAAGACCAAACATCCACAGCTGCATATAGAGGCAAAGTTTTACAAAATGATGCAAGGTGGAGTTGGCATACCAGCCATCAAATGGTGTGGAACAGAGGGTGATTATAATGTTCTTGTCATGGAGCTTTTGGGACCCAGTTTGGAAGATCTATTCAACTTTTGCAACAGAAAGTTTAGCATAAAAACAGTGTTGCTCTTAGCTGATCAAATGATCAGCAGAATAGAGTATGTGCATTGTAAAAACTTCATACATCGGGACATCAAACCAGACAATTTTTTGATGGGACTGGGAAAGAAGGGCAGTTTGGTGTATATTATTGACTTTGGACTTGCCAAAAAATACAGAGATCCACGGACTCATCAGCACATACCTTATCGAGAAAACAAAAATTTGACTGGAACAGCCAGATATGCCAGTATCAATACTCACTTGGGAATTGAACAAAGTAGAAGAGATGATTTGGAATCACTTGGTTATGTTCTCATGTACTTTAACCTGGGAAGTCTTCCCTGGCAAGGTCTCAAGGCTGCCACAAAGAAACAGAAGTATGAAAGGATAAGTGAAAAGAAAATGTCCACACCAATTGAAGTCCTTTGCAAAGGGTTTCCATCCGAGTTTTCTACATACTTGAACAATTGTCGATCACTTCGCTTTGATGACAAGCCAGATTATTCTCACTTACGACAGCTTTTTCGGAATCTGTTTCACTGTCAAGGATACGTGTATGACTACATCTTCGACTGGAATCTTCTCAAGTTTGGCAGCGGTCGAGACCAGGAACCTGGTGCTGATAGGGCTGCACTTAGGGGAGTAGAGAAAGCTTTAGAAAGGGAACGTGAACCAAGGGAACCAGAGAGGAATCATCGAAGCTCGACCACCCGTGCAGTGGCTGGTGCAACGTCCGGTCGACTCCGTGAACCAATGAGTGCAGCCACTGCTTCCCCAGTTGGAGCGCAGCGGCCGGTATCAAGAGTTGAGAGAGAACGGAGAATCACACGACTCCATCGCGGAGCCCCCGCTGATGTGACAAGCGGAGAACTTCCCCGTGGTGACATCTCCCGTATGTCTGGGGCCCATGTGCGCTCAACACCGGTGATGACGCCGACTTCTTCGGGGACTGGATTGAGGCGAGCGAGTGGGGCAAGACAGGAGAGAGATGTTAGCGGAATGATGGAACTTACAGCTGTGCGGCACTCGTCAAAACATTTAACTCGAGCTCCCAAATGAATTAACGGTTTCACTGGTATTTTCACCAACTTGATAACAAAGGAAGCATTTTTTTCTTCGTCCTCCTCGATTTTATGGATTCTTTTGAAGTTCCATGCCACTTCTGAAATTTTCCATTTCGTTGTTTACCAGCCACTAATGTTCATCACTCTACCTTGTCATGTTTGGCGTCCCTTTTTTTAACCCTACATTGCTTTGACAGCGTCATTTTCTGTTCCAGGAAAGTTCTTAAAAGTATGGCGTTGCGTTACTTTATCGCACATTTATTTACCAATTTCTTGAAGTGTGTTCATGTATGATCAAATCCTAATTTTTTTTCCTTAGGGTTTACAACGCATGAAATTCAGCGAAATAAGTATCTTGACACATTGCAGTATTTGACAACTGACAAGTAGCGATGATGTTCATTGCGAAGGGGTGTTAATATGTAGAAATTAACCCAGCGGCAATAGACGACAGTTCATTTCTTTCTAATCGACTCCGGAATTTTTTCGGTGATTAGCGTTTATCGTGAATCGATTGCTTGACAGAGCAAAGTCTTGTAAATAAATAATATTAAGTGATGAAGCAGTCCTTCAGTGATGACCACTGTATAGTAAGACAAAATAGAGATTGAGAGTGTCTTTTCTTTTTGACAATTAAAGTCTAAAACTGGCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DC28	Casein kinase I isoform delta OS=Mus musculus OX=10090 GN=Csnk1d PE=1 SV=2
Q06486	Casein kinase I isoform delta OS=Rattus norvegicus OX=10116 GN=Csnk1d PE=1 SV=2
Q5ZLL1	Casein kinase I isoform epsilon OS=Gallus gallus OX=9031 GN=CSNK1E PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000849 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR050235 all species →	Family	Casein Kinase 1 Ser/Thr Protein Kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11909 all species →	CASEIN KINASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0032436 all species →	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0090263 all species →	Biological Process	positive regulation of canonical Wnt signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0016.g88.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.