Gene detail

Detailed information of amic_s0017.g20.t1 in Acropora microphthalma

Genomic Location: sc0000017_pilon:283196...289150
NR annotation: XP_044185127.1, uncharacterized protein LOC122965241 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amic_s0017.g20.t1

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTCATCCGGACTGTTTAAGACTGATGCTTGATCATGCAAACATAAAGAGCATTTGCAAGAGAATGAGACGCAATCCCCAAGGAATGAATTTGTTGCATTTTGCAATTGGTGAGAATAGGGAAGTATTGGAATGTGACAACAGGGCGAAATGCTTGGAACTGCTGTTCAGTCAAGATAAGGCAGCATGCTCTAAGCTATTGGAAGAGAGAGATGCCAGGGGATTTTCTCCATTGGTCGCAGCCATCTATGCTGGACAGCACAAGTGTGTTGCAGTATTACTGAAGATGGGCGCAAATACTTTTGAATTTAAGACTGGTGATGGTGGAAACATGTTGCATTTTGCTGTAAAATATGCGTCCCACTTCAAAGATTCACCGGAATGTGTAAATGACACCTCACTTTCCCTAAGAGAAGTCCTAAAGGCATTAAATCTTCTTATTGATGATGTTGATAATTATGGTTTCACTCCTTTAATGTACGCTTGCAAGAGTGGCAATCCTCAATGTGTCAAAACACTTCTGGAGAATGGAGCATCGGTCAATTTTTCTGACAGCCATGGTACATCAAGCCTTTGTCTTGCGGCAATGTCAGGAGATACAGAATGTGTTCAGTTACTGCTCAGCTTGAAACCAAAACCAGAGCAGGAGTTTTTCTTGAGAGACTTGCTGAGGAAAGGAAGGAATAAGCTGGAGAAGAAGAGGACAGTAAAGGTTAGCAAAGAAAACTGTCTGTCTACAGGGAATGCAGTAAGAAAAAAAGACAAAAAGGCAATAAAACGTAGGGGAAGGGAGGAGAGGAAGGACCTCAAGAGAAGAAGAATTGAGTTCGAGAATGAAAGAGGCAGCACCCAATACCAGCAAACAGTCCAAGAGGGTACAACATGTGAAAAAGATGTTGGACTATGGCACTGTTCTGATATGGAAGGGATACCTCCACCAATTCAGCCACCTCAGGGTGAATGTTTGTCTTCAGTGGATTCTGCCATAAACATTGTGTTTGATGTGGAAACTACTAGCTTTGCCACAGATGCTGACATAATCCAGCTTTCAGCTGTCCATGGCAATGATGAATTTAACATCTATATCATCCCTGAGCAGAAAATCAGTATTTCAGCCTCCTTAGTAACACAGCTTGATATGGTGGGAGGTAGACTGTTGCACAAGGGAGAGCCTGTGCCTGCAGAGCAACCAAGAGAGGCTTTTGAAAAGTTCTTGGCATGGCTTAAGGGTAAAAAAGAGAAAGTGGTACTCCTTGCCCACAATGCTAAATGTTTTGACAGCAAGCGAATAATTTATGCCCTAAAAAAGTATGATCTGCTGAGTTCCTTCCAAGAGTGTGTTCTAGGTTTCATTGATACCCTGGCTTTATTTAAGAAAGTCTTTCCTGGTAGAGAGACATATTCTCAGGAATGTCTAGTTGCTGATCTTTTAGGGGTTTTCTATGTCTCTCATGATTCTCTTGAAGACGTGAAGGCTCTCCAGAGGCTGGTATCCTGTAAAAAAGTTGAGGAAAACCAACTAATTGAGTCCAGCTTTTCAACAGAGTCTGCTGTGCAAAGTACTGAATATTGTGTAAAGAAGATGGTCAATTTACGGACCCTTCAACCTCTTATTGCAAGCAAAGTTGTTAGCAAAGGAATGGCTGAAAAAATTGCTGGTTCTGGGTTATCTTTGCACCACCTTCAACTTTCTTTTGAGAGGGGAGGGGGAGATGGGCTCATCAGCATTTTATCAGACCACGTAAATGGAAAGCCAAGGGTAACAAAAAACAGAAGAATTATTTCACAGCTAAGCAACTACTTTGGCTGCAATAACGAAACAAAcagcgacctgtttctcgaaagtcccgaaacttttcgggagctattcaggtgacataattctctgtaccttcaaaacgaagtcatcttgaggcatgaaactttacagtttgagttattttaattattattccgtttacaagaaaatacaaaaagacgagctttacagcatcagcaggtgggagttttacgaatggcttttcgggccagaaaagttttcgggactttcaagaaagcgagcttttcaaccgagtttgctgTGCAATATACTGAATATTGTGAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00929	RNase_T	Exonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR013520	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24178	MOLTING PROTEIN MLT-4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0097543	Cellular Component	ciliary inversin compartment	Interproscan
GO:1904108	Biological Process	protein localization to ciliary inversin compartment	Interproscan