Detailed information of amic_s0017.g52.t1 in Acropora microphthalma

Genomic Location: sc0000017_pilon:665325...672196
NR annotation: XP_029189370.1, ras-related protein Rab-38-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q55E31Ras-related protein Rab-32B OS=Dictyostelium discoideum OX=44689 GN=rab32B PE=3 SV=1
Q8QZZ8Ras-related protein Rab-38 OS=Mus musculus OX=10090 GN=Rab38 PE=1 SV=1
P57729Ras-related protein Rab-38 OS=Homo sapiens OX=9606 GN=RAB38 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001285 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071
all species →
RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001806
all species →
FamilySmall GTPaseInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47981
all species →
RAB FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003924
all species →
Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan
GO:0005764
all species →
Cellular ComponentlysosomeInterproscan
GO:0005770
all species →
Cellular Componentlate endosomeInterproscan
GO:0008333
all species →
Biological Processendosome to lysosome transportInterproscan
GO:0045335
all species →
Cellular Componentphagocytic vesicleInterproscan
GO:0090385
all species →
Biological Processphagosome-lysosome fusionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0017.g52.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP