Detailed information of amic_s0017.g94.t1 in Acropora microphthalma

Genomic Location: sc0000017_pilon:1134765...1143654
NR annotation: XP_044163244.1, inactive rhomboid protein 2-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JPA1Inactive rhomboid protein 2 OS=Xenopus tropicalis OX=8364 GN=rhbdf2 PE=2 SV=1
Q6PIX5Inactive rhomboid protein 1 OS=Mus musculus OX=10090 GN=Rhbdf1 PE=1 SV=2
Q499S9Inactive rhomboid protein 1 OS=Rattus norvegicus OX=10116 GN=Rhbdf1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001895 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01694
all species →
RhomboidRhomboid familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035952
all species →
Homologous_superfamilyRhomboid-like superfamilyInterproscan
IPR022764
all species →
DomainPeptidase S54, rhomboid domainInterproscan
IPR051512
all species →
FamilyInactive RhomboidInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45965
all species →
INACTIVE RHOMBOID PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004252
all species →
Molecular Functionserine-type endopeptidase activityInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005789
all species →
Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0042058
all species →
Biological Processregulation of epidermal growth factor receptor signaling pathwayInterproscan
GO:0050708
all species →
Biological Processregulation of protein secretionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0017.g94.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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