Detailed information of amic_s0018.g100.t1 in Acropora microphthalma

Genomic Location: sc0000018_pilon:806619...816317
NR annotation: XP_015761737.1, PREDICTED: leucine-rich repeat-containing protein 43-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8N309Leucine-rich repeat-containing protein 43 OS=Homo sapiens OX=9606 GN=LRRC43 PE=1 SV=2
Q95JT3Leucine-rich repeat-containing protein 43 OS=Macaca fascicularis OX=9541 GN=LRRC43 PE=2 SV=1
Q3V0L5Leucine-rich repeat-containing protein 43 OS=Mus musculus OX=10090 GN=Lrrc43 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008029 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12799
all species →		LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR025875
all species →		RepeatLeucine rich repeat 4Interproscan
IPR050576
all species →		FamilyCiliary and flagellar integrity-associated proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45973
all species →		PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0018.g100.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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