Detailed information of amic_s0018.g154.t4 in Acropora microphthalma

Genomic Location: sc0000018_pilon:1365029...1384573
NR annotation: XP_044173606.1, otoferlin-like isoform X4 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9HC10Otoferlin OS=Homo sapiens OX=9606 GN=OTOF PE=1 SV=3
Q9ERC5Otoferlin OS=Rattus norvegicus OX=10116 GN=Otof PE=1 SV=2
Q5SPC5Otoferlin OS=Danio rerio OX=7955 GN=otof PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000314 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08151
all species →		FerIFerI (NUC094) domainDomainInterproscan
PF00168
all species →		C2C2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000008
all species →		DomainC2 domainInterproscan
IPR037722
all species →		DomainFerlin, third C2 domainInterproscan
IPR035892
all species →		Homologous_superfamilyC2 domain superfamilyInterproscan
IPR037720
all species →		DomainFerlin, second C2 domainInterproscan
IPR012968
all species →		DomainFerIin domainInterproscan
IPR037721
all species →		FamilyFerlin familyInterproscan
IPR037726
all species →		DomainFerlin, first C2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12546
all species →		FER-1-LIKEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007009
all species →		Biological Processplasma membrane organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0018.g154.t4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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