Detailed information of amic_s0018.g36.t2 in Acropora microphthalma

Genomic Location: sc0000018_pilon:248086...249517
NR annotation: XP_029194246.2, carbohydrate deacetylase-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q14BV6Carbohydrate deacetylase OS=Mus musculus OX=10090 GN=Ydjc PE=2 SV=2
A8MPS7Carbohydrate deacetylase OS=Homo sapiens OX=9606 GN=YDJC PE=1 SV=1
A2BIR6Carbohydrate deacetylase OS=Danio rerio OX=7955 GN=ydjc PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006942 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04794
all species →		YdjCYdjC-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011330
all species →		Homologous_superfamilyGlycoside hydrolase/deacetylase, beta/alpha-barrelInterproscan
IPR006879
all species →		FamilyCarbohydrate deacetylase YdjC-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31609
all species →		YDJC DEACETYLASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0019213
all species →		Molecular Functiondeacetylase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0018.g36.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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