Gene detail

Detailed information of amic_s0018.g98.t1 in Acropora microphthalma

Genomic Location: sc0000018_pilon:778330...781588
NR annotation: XP_015769264.1, PREDICTED: 3-mercaptopyruvate sulfurtransferase-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0018.g98.t1

ATGGATGATAAAAAATTGTGAATACCACACATTTAGTGTGGTCATTTGCCATGTCATGCTTGATACTTAAAAAGCCATGGGTTTTCTGGTTTCTTTATTTTTTTATCAACACTACTGAAGGATGGTTCTTCAAATGAAGTGGTGACACTTTGTCAGTAAAGTTAAAGTGATTGATTTGTTACCGGAGCGAAGGTACATTTTAACAGAACACTGTATCAATTCCCCTGTTCCCAACAGCCAGGACTCTTATGACACACACTGACAATAACTGGTTCTAAGAACCCTCCTGTAAATGATTTCTTTTGTCTTTAAGCTCATGAAAACACCGTAATCCGAGGAACAGTAGGTCTCCTATTTAAACGGAGTTGTCTGATTTTCATAATCTTAAAGTAAATATTAATAGCCCTCAAACCATTTTACGTTTTGAGCGATCATAAAACTTTGATGAGTCTGCCAAAACAGCCTGGGTTTGAAACTGCGGCAATTCACGAGAGTAGAACCTCCTTTCTATAACTTTATCAAAAAAAGCACATAATTTCTTGTCATTAAGAGTTCCTGGCTTCAACTGTTTTGTGTCTGTGCAGTTAAGATTGATCATATCAGCTCCTATTTCTTCAGCAAGATTCAATCCTCTAGATGATGAAAGAATCCTTGCAGTTCCTGCTTGATCTAGTTTAGTTCCAATGATAATAACAGGAATCTGGTTTCCTGCAAACTGCTCACGATCAAAATCATCCCCAATGTCAATGGTGAGCTCTAACCAACCACCTTTGTTTGTATTAGAGGAAGATTTCGACTGCTTTGAATTGAAAGCATTGCCTGCATCCTTCCCTGAGCCAAGAACTTCCGTTAACCAGTGTCTAAGATTTGTAAATGATTTCTTATTGGTTAAATCGTGGACAAGGATCAATCCATTGACGCCATTGTAGAATATAGAGCGACAATTTTGATGACTGGCTGAGCCACCAACATCCCAAAACTCCAGAAAGAAACTTTTCATACCAGGCGTACCCTCTTTGTAATCATACAGTTTTACCTCCACAGTACAACCTATTGTCCATCCTGGGTTTGAAATGCTTTCGTTGTGACAAATGTGATGAACTAATGAAGTCTTCCCCACCCCGGAATCACCGACAACTAATATTTTCACTTTCTCTAGGGCAGCCATTATGACACGTCTCACCCCCAAGAAAACTAGGCACTAGGTACCAATTTGTAACGGGTGAATGTCAACGCCTGATCAATTGTTACCATTTGCCATCCTTCCTTCAGTCTTGAAAACGTGAGACAACGTTTTCTGTCAATTTCCCCCTAAAATGACTGTCCCGACTCTCGTCAAGGCCCAGAGGCTCCGTCAATTGATGCATCAAACCACAAAACATCTCCGAATTTTGGATGCGTCGTGGCACCTTCCGAAGGAAGATCGAGACGCAAGGCGAGAATATTTAGCTCATCGGATCCCTGGAGCGAATTTTTTTGACATTGCTGAGTGTGTTGATAAGTCCTCCCCTTACGATTACATGCTACCAGACACAGACGACTTTTCAAACTACGTGTCAAGCCTGGGAATCAATAATCACAGTCATGTTGTTGTGTACGATAACAATAACTCTGGTCTGTTTTCATCCCCTCGGGTATGGTGGATGTTTCGTGCATTCGGTCACAAAGAGGTCTCAATTTTGGATGGAGGGTTTTCGAAATGGTTAGCTGAAGGTTTTCCGATCGAATCGGGTCCAGAGAACAAAGAGAAAATTGAAGAAAGGACAGTGTTCAATGCTTCTTTGAACACAGGAATGTTTTGCAACTTTGACTTTGTAAAAGCCAATTTACCTCAACAACACTGTCATGTTGCGGATGCTCGATCTTCGGGAAGATTTTATGCCACTGATCCAGAGCCACGCCCAAACTTCCCATCTGGTCACATTCCAAGCTCGAAAAGTGTACCTTACTCACAATGTTTCGATCCAGAAACCAAGCTCATGAAAACTCCAGAAGAGTTAAGGAAAGTTTTTGAAGATGCAGGTATTGATCTCAATAAGCCTCTTATTACTACCTGTGGGTCAGGGATTACTGCATGTGTTGTTGCATTGGCTTCGCATCTTTGTGGCAAGTCAGACACCATGGTCTATGATGGCTCCTGGGTTGAATGGGCACAGCGCGCATCTCCCAATATGATCGAAAAGAATTAATAGAATTGAAGGTTCAAACTTGCACATCCAAGCCACAAACTGTTGAATCCCTTTTACTAATTAATAATATTTTATTCTTCCTTTATCAGTTGCCAAGCAACTATCATTACAGTCACTATTATTATTATATACAGACACAAATAATGTGATTATtagggagctcaagcaaacacaacgtcgacggaagcgagaacgtcatctgaaaatgtaactttgcatttctacaatcatttttcaataattattcaaagtcattatgcttgaaaaatttgttcttactatcctggaattaaattggaaccagctcttgcaacatgagaggacaaaattgaacatttgtcatcatatgctcacgttgtccacacaactgcaaaacaggtcatttcacgtcgtagaaagaatgagaacatcttcaaattttcaaaagatgtgcaaagtgtgcaaaatactgtttttcattgtcaaatatgcaaatttatggggtttttgttgccgtcgtcattgtggttgcttaccggtaagcttcctaTTATTATTGTAACTGAACCATCAAATACCAATTCTTCAATTTTGTGTGCTTCTCCAACCACCAGTTGAGCTCAACACAGAAGTCACATGATTAATGAAATACACCAAAGCAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99J99	3-mercaptopyruvate sulfurtransferase OS=Mus musculus OX=10090 GN=Mpst PE=1 SV=4
P97532	3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3
P25325	3-mercaptopyruvate sulfurtransferase OS=Homo sapiens OX=9606 GN=MPST PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004485 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00581 all species →	Rhodanese	Rhodanese-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001763 all species →	Domain	Rhodanese-like domain	Interproscan
IPR036873 all species →	Homologous_superfamily	Rhodanese-like domain superfamily	Interproscan
IPR045078 all species →	Family	Sulfurtransferase TST/MPST-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11364 all species →	THIOSULFATE SULFERTANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004792 all species →	Molecular Function	thiosulfate sulfurtransferase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0016783 all species →	Molecular Function	sulfurtransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01011	TST, MPST, sseA; thiosulfate/3-mercaptopyruvate sulfurtransferase	EC:2.8.1.1 EC:2.8.1.2	Sulfur relay system	ko04122	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.