Gene detail

Detailed information of amic_s0019.g17.t3 in Acropora microphthalma

Genomic Location: sc0000019_pilon:197607...213555
NR annotation: XP_029194319.2, LOW QUALITY PROTEIN: phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0019.g17.t3

CTATGAGTGAGCGAACACTGCGGATGCAGAAGGCCATCGACTGAAGGGCCTTCACCTTATCGTAGGTAACGACTGCAAGAACACGTAAGCTGCAGACGTCCGGGCGAATTTTTTTACGGAGCATTCGCGAGAAGGCTTCAACCTGATCTATGGCTTCCTCACGAAGAGATCTATATTACAAGAACCGTTAGAATTGAGCTGAGTTTCATGTGAGCTTCAGGCCATCGTGTTCTGACCCGTCACCTCGCCGCCTTAGGCATACAGACCTGGAGGTTTGGCAACAACGTATGAAGACGATGCCTCCTGGCTATCAAAGAAGAAGCGAAGTGAACTGTTTCTTGAGCCATAGAATAAGGGAATTTTGGGCCGTAAAAGACAATGGAACCGGTGATTTCGCAGACAAGTACAACCAACATGATGAAGACGAAAAATTGGGGGACTTCGGTGGCAGCCTAGTGGCGTCGTTTGGGAATGAGTTGCATTGTGCCTTCAGTTGTTTTTCGTCTCTTAGAGATTATTGCTTCAGGATAAATTGAAAAATATGAGAGAGATTGAAAATTTCATGCGCTGCAGCTTGGCGTTCGTGAAATGACCGAGAGTGACGTCGAGTTGGAAAGTGCACCTTTTCGTGGAGGCGAATCAACTGGAGGGCTTTCGGAAACGTATGATGTTAAGGAGAAATTGGGCGCAGGAATTTCTAGTGTGGTGCGAAGATGTTATCACAAAGTAACAGGAAAGCCTTACGCCGTAAAAATAATCGATAAGCTCAGTGATGCAGGTGGAGTGGACATTGAGGCAACTACTAGAGAAGAAGTCCTTGTCCTACTTGCCTTACAAGGGCATAAAAACATCATTGGTTTGGTGGATGTCTTTGAATCTGATGTGTTTTTTTTCCTGgcctgtttctcaaaagtttcaaaatgtttcagattAGCAGAGAAAGGGGAGTTGTTTGACCATCTCACCGAACAAGTGACACTTTCAGAAAAGAAAACTAGGAGAATCATGCAAGAAGTGTTTGAAGCTGTAAAGTTTATGCACAATAGTGGTGTTGTACATAGGGATTTAAAGCCTGAAAATATACTTCTTGATGAGAACTACAGAGTGAAAATTTCAGATTTTGGCTTTGCTGTTAATTTAAAAGATGGAGAAACTCTGCGAGAACTTTGTGGCACCCCTGGTTATTTATCCCCTGAAGTTCTTCAATGTTCTATGTTTCCTGATGCTCCAGGATATGGAAAAGAAGTGGACATGTGGGCATGTGGAGTGATAATGTACACATTACTTGTAGGCTGTCCTCCTTTCTGGAATCGGCGACAGGTTGTCATGTTAAGGTCAATAATGGAAGCAAGATACCACTTCCATAGTCCAGAATGGGATGATATCTCAGTAGTTGCTAAGGATTTGATTTCTAAGCTCCTAGTTGTTCAACCAAAAATTAGATTAACTGCAGAGGAGGCTCTGGAACATTCTTGGTTCAAAGGAGCTCAGCAAGCACGTAATGAGAGATTTTCTGCAAGATGGAAATTCAAGGGAACTGTGATAGCAATCATAGCAGTGCTGGAATTGTCAAAATTTTTGAAAAACAAAATGCTTCCAGTGACATTTGAAACAGTTTTAAGGGAGCCATATGGTGTTAAACCTATCCGCAAAATGATTGATGGCTGTGCTTTCCGCATCTATGGGCATTGGGTTAAGAGAAACAAGGACCAAAATCAGAACCGTGGGGCTTTGTTTGAAAACAAGCCACACAGAGAGAAACACAATGGAAATGGACATGCACCTAGAAAGACTGGGGTCTTGGATTCTTATAATGCATCCTTCAGAGTATCATCCCTGGAACAGATTCAGTACAAAACTGTTCGACAGAAACCTGTTTATCAATAACAGAACCCTTCTTTGTCATTTTTGGCAAAAAAAAATTGATGAAAAAGTGCATTCTTGAAAACATGTTCCATTGTACATGGTACCTGTTGAGGCCTTTTTCAGTGCTGTACCTTCAGTGTACAATAATTGCATTTTGACCTTGATTTCTGGTGAGTTGGATGTGGTGTTGGATGTAGTCATTTGCTAGCCTTGGTGAAGGAAGCATGTCTATGCATTTTTTCTGATTTGAGGTGGATGAGGAATCTAAAACTGATAGATCAAGGAAAAAATGAATAAAGTCCCACACTTACTATCAATCCACTCTTAGCAGGCTCTTCAAGTTCAGTGATCTACTGATTGCCTTTTGTGTAACAAAGGAACTGGTTTGTCTTAAATTAAAGAAAGAGCAACTGATGACTTAAAAAAACATCAAGTGACTTATGAAGCAGGCTGTGTTCCACTTTAACAGTTATACAGTTACTTTATATTGTACTTCTAACATCTCAACTCTACCTCAAGGCAACTGCATTATAAGGAATAAGCAAGATATttattgctattttattatttttgttattgttgttatttattgttattattattattatGACTTAAAGGCTCTATGTGTATATTGTAGTTATTTTTAACAGCCTATATTGAATTATAAAATGCATGTATATATGTAGCTATTTTTTCTTTTAGCTCTATATTAAATTATCAAGTTTGAGCAAACAGTTACAGCCATAATGGCAGACAAAACCACTTTAAAATCAATGCTTTTCCTTTATAATTAATAATTTATTCTTGGGACGAATGGTGAATTAATTTATGTTGCTTAATGTTGGTGATAGTGCAGAAAAAATTATCCTTTTTTTTTAATAACAAAGCTCATGGGAGCATTTGTTTGGCAAGGTCCATAATGTTATAAATAAATATTGCAACACCATTATCATTTAAACTTAAATAAACATTTCCTATTTTGCCTGTCTTTATCCATGCAAGGATTATGGCAAAACAATTTTTTTTGGCAGGATAAACAATTTTTTTTAGTTGGAATTGATTTTAGTCCCAAATGATGGTTAAAAAAATAAGATTGTTATTGGAAATGAATCAACCTATTAAACTGAATAAAATCTAAATCAATTTCTTTGTTTATGAAAAAGGGGAGCCTTCTACATTATACCATAAACAGCTATCATGAAAACCCCTCTTGGAGTTTGGGAGAGTTCCATACAATACTGCAGGAGTTAACATTAAGCCACAACTGCCACTTGAGTCCTTCATTAAACCATTGTAGTTCCCTGTGTTCTCATGGTAAGCATTTAATGCCGTCAAGTTTCCTCAGTTTAACTAGTAAAGTGGCCAATTGCTCAAATATTTCTCCATCCAAACAGCAGCATACCATGTCCGTAGGTCCCAACAAAATGGTTACGATTTTGCTTGTTATAGGGCAGGAAAAAGAAAGGTCATGATGGAAGGTCATCACCTCTATTGGAAATAATAGATTTCAGTAATGTTATTATTGTGCAATATTGTTATTGTGCCAGTAATTGGCAAATAATATTGGACAAATTTTGTAGAGGAAATGCTAGAGACCTCCTTCGTGTGGTGAGTTTGTTTCTGCCCTTGAAATTGAAATGAAACTTGATCATACTAATGACTGCACTCATTCAATTGGCCATTCCTGAGTTCAATAATTTCCTTTTTTTATCAAAGTGTGCAATTTGTATTTATATGCCCTTTAGCCTTTTCATCTTAGACTTGATAATGAGATTATGTTATTGTTAAATTGTTGTCAAATTAACGTTTTAGCTGAAAGGAATGTTTTCCTAAGCCCTTTTTTCCATAAACTCTGTATTTACTTGCACATTTTTTGCTTTATTACGGGTGGTTCACTCTATTTGGAAAGAAATCATTGCATTTGTTTTGCATTGCAACAACTGTATTTAATAATTGGCATGAAGCGTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KJ16	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform OS=Bos taurus OX=9913 GN=PHKG2 PE=2 SV=1
P00518	Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform OS=Oryctolagus cuniculus OX=9986 GN=PHKG1 PE=1 SV=2
Q9DB30	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform OS=Mus musculus OX=10090 GN=Phkg2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003747 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR002291 all species →	Family	Phosphorylase kinase, gamma catalytic subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24347 all species →	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004689 all species →	Molecular Function	phosphorylase kinase activity	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0005964 all species →	Cellular Component	phosphorylase kinase complex	Interproscan
GO:0005978 all species →	Biological Process	glycogen biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00871	PHKG; phosphorylase kinase gamma subunit	EC:2.7.11.19	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.