Detailed information of amic_s0019.g97.t1 in Acropora microphthalma

Genomic Location: sc0000019_pilon:1028213...1032379
NR annotation: XP_015764926.1, PREDICTED: uncharacterized protein LOC107343819 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008121 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF00931
all species →		NB-ARCNB-ARC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051787
all species →		FamilyEffector and Ciliary Development-Associated ProteinInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR002182
all species →		DomainNB-ARCInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45641
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0043531
all species →		Molecular FunctionADP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0019.g97.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP