Genomic Location: sc0000020_pilon:1622599...1695870
NR annotation: XP_029211241.2, basement membrane-specific heparan sulfate proteoglycan core protein-like isoform X3 [Acropora millepora]
| CDS | ||||
| amic_s0020.g86.t2 | ||||
| Transcript |
| amic_s0020.g86.t2 |
| Protein |
| amic_s0020.g86.t2 |
| Uniprot term | Description |
|---|---|
| Q05793 | Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 |
| P98160 | Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4 |
| Q06561 | Basement membrane proteoglycan OS=Caenorhabditis elegans OX=6239 GN=unc-52 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00054 | Laminin_G_1 | Laminin G domain | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF13385 | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF00052 | Laminin_B | Laminin B (Domain IV) | Domain | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF00053 | Laminin_EGF | Laminin EGF domain | Domain | Interproscan |
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR001791 | Domain | Laminin G domain | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR002049 | Domain | Laminin-type EGF domain | Interproscan |
| IPR000034 | Domain | Laminin IV | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR051170 | Family | Neural and epithelial cell adhesion domain-containing protein | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12231 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0043005 | Cellular Component | neuron projection | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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