Detailed information of amic_s0021.g123.t2 in Acropora microphthalma

Genomic Location: sc0000021_pilon:1947616...1961920
NR annotation: XP_044171679.1, uncharacterized protein LOC114977630 isoform X7 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0V8S9Contactin-associated protein-like 5 OS=Gallus gallus OX=9031 GN=CNTNAP5 PE=2 SV=1
Q593B6Coagulation factor V OS=Pseudonaja textilis OX=8673 GN=F5 PE=1 SV=1
Q0V8T4Contactin-associated protein like 5-3 OS=Rattus norvegicus OX=10116 GN=Cntnap5c PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000020 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661
all species →		hEGFHuman growth factor-like EGFDomainInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR013032
all species →		Conserved_siteEGF-like, conserved siteInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR051022
all species →		FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24049
all species →		CRUMBS FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007157
all species →		Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0032991
all species →		Cellular Componentprotein-containing complexInterproscan
GO:0045197
all species →		Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0021.g123.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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