Detailed information of amic_s0021.g132.t1 in Acropora microphthalma

Genomic Location: sc0000021_pilon:2180721...2186509
NR annotation: XP_015774461.1, PREDICTED: vacuolar protein sorting-associated protein 52 homolog isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8N1B4Vacuolar protein sorting-associated protein 52 homolog OS=Homo sapiens OX=9606 GN=VPS52 PE=1 SV=1
Q8C754Vacuolar protein sorting-associated protein 52 homolog OS=Mus musculus OX=10090 GN=Vps52 PE=1 SV=1
O55166Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus OX=10116 GN=Vps52 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20655Vps52_CVps52, C-terminalRepeatInterproscan
PF04129Vps52_CCVps52/Sac2 family, coiled-coilRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048361DomainVps52, C-terminalInterproscan
IPR007258FamilyVps52Interproscan
IPR048319DomainVps52, coiled-coil domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14190SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000938Cellular ComponentGARP complexInterproscan
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0007041Biological Processlysosomal transportInterproscan
GO:0019905Molecular Functionsyntaxin bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20298VPS52; vacuolar protein sorting-associated protein 52-Membrane traffickingko04131deepkoala

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