Detailed information of amic_s0021.g135.t1 in Acropora microphthalma

Genomic Location: sc0000021_pilon:2234795...2240886
NR annotation: KAJ7370910.1, DNA repair protein RAD50 [Desmophyllum pertusum]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A1L8GXM0DNA repair protein RAD50.L OS=Xenopus laevis OX=8355 GN=rad50.L PE=1 SV=1
P70388DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1
Q9JIL8DNA repair protein RAD50 OS=Rattus norvegicus OX=10116 GN=Rad50 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001857 (this species only)

 Pfam domain
No Pfam domain signature was detected for amic_s0021.g135.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18867
all species →		RAD50Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000722
all species →		Biological Processtelomere maintenance via recombinationInterproscan
GO:0000794
all species →		Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003691
all species →		Molecular Functiondouble-stranded telomeric DNA bindingInterproscan
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan
GO:0007004
all species →		Biological Processtelomere maintenance via telomeraseInterproscan
GO:0030870
all species →		Cellular ComponentMre11 complexInterproscan
GO:0032508
all species →		Biological ProcessDNA duplex unwindingInterproscan
GO:0043047
all species →		Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051880
all species →		Molecular FunctionG-quadruplex DNA bindingInterproscan
GO:0070192
all species →		Biological Processchromosome organization involved in meiotic cell cycleInterproscan
GO:0090305
all species →		Biological Processobsolete nucleic acid phosphodiester bond hydrolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0021.g135.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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