Detailed information of amic_s0022.g107.t1 in Acropora microphthalma

Genomic Location: sc0000022_pilon:1797009...1809639
NR annotation: CAH3189033.1, unnamed protein product [Porites evermanni]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P95896Amidase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=SSO2122 PE=1 SV=1
P22984Amidase OS=Rhodococcus erythropolis OX=1833 GN=amdA PE=1 SV=2
Q9AHE8Urethanase OS=Rhizobium radiobacter OX=358 GN=amdA PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000882 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00709
all species →		Adenylsucc_syntAdenylosuccinate synthetaseDomainInterproscan
PF01425
all species →		AmidaseAmidaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020556
all species →		Conserved_siteAmidase, conserved siteInterproscan
IPR036928
all species →		Homologous_superfamilyAmidase signature (AS) superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001114
all species →		FamilyAdenylosuccinate synthetaseInterproscan
IPR023631
all species →		DomainAmidase signature domainInterproscan
IPR042109
all species →		Homologous_superfamilyAdenylosuccinate synthetase, domain 1Interproscan
IPR042110
all species →		Homologous_superfamilyAdenylosuccinate synthetase, domain 2Interproscan
IPR000120
all species →		FamilyAmidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11895
all species →		TRANSAMIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004019
all species →		Molecular Functionadenylosuccinate synthase activityInterproscan
GO:0006164
all species →		Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01426E3.5.1.4, amiE; amidaseEC:3.5.1.4
Styrene degradationko00643deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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