Gene detail

Detailed information of amic_s0022.g81.t1 in Acropora microphthalma

Genomic Location: sc0000022_pilon:1399740...1403346
NR annotation: CAH3024389.1, unnamed protein product [Porites evermanni]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0022.g81.t1

ATGACTGAGACACTGTTTTCCTTGGAAATTCATGTGGAAAGTGTAAAAAATATCCGACTTCTGTGCAAGCTGCCGGCTCTCTGCTTTCGCATGCTGGATTTCCCTACTATGATTATACATCATGTACCGCCTCTAAGAGCAGAAAAACTGCGTCAAAAACTACTTTTAGAAGACAGAGAAACTATGCTTGATGAACTCAAGGATCGATTTGGACATTTCCATTTCCATAAAGGGAAATCCTGTTTATTCAAAGCAGGCATCGAGACCTTGCAAGCTCAACTTCAAACTGTACCCCTGTACGCGATGTTGATGGATTTGTGGCCTAAAAAACCTACTCTAGTAGGAAGCACCGTGATTCCCTTGAAAGAAGCTGTGAATAAGATTAGCGCAGATGTTTACCAGAAAGGACTTGAAGTGCCCTCTTTCTTTAAAAATGAGGGCGAATTTACGGTTTACAATCTTATGGGGTCTGGTATTGCAACAGTGAAACTGGGTTTCAGGTTGTTGAGTCTTGGGGGTTCACTCATCCCTCATATTCCCAGAGAAGCCTTATCAACCAAAGCCACAAAAAAGCGTGAAATTGGAGGAAAGAATGAGAGATCTGTTGAGAATGTTACAGATTTCCATGCAATACAACTTGGAAGGGAATCAAATGAAATTGAAGAAGGACTTGAGGCAAGATCTGTGGGAAACAAAAGTGACGGGAGAGTGGTGCAAGATAGACAGAGGGAAGGCAGCAAGTGTGACACAGGAGTTCAAACAAATATCTTTGCAGTGAACGTTAATGGCTCTGGAACAAGTGATCAAGACAGGTGGAAAAGTGAAGATGATTTTGTTATCAACAACACATTTTGTCCTCCACCTCTTTTCTATAATTGCAATGCAGCACCTCAGAGTCAATCAGCCTCAGTAGTACCTAGGAAATGTATTCCACAAAGTGGCAGCGGTAGCACAACTCAGATTTCCCATAAGAGGGACAAAATGTCAGATGTAGATTTTTTGTATTATGATCCCAGTTTGGCACAAGCAGATGGATCAATGAAACTTGTTTCAGCTTCAGTACAAACGGATGATAAATTCATGACGTTTGAGGCAGATCAAACTCATTTGGATGTAACTCGGGGATTAAGGAACTTAGAAAATTTTACCTCAGGTAATAGACTTCCGGTTTTGAGCGCTTTGCTTCAAGAATTGTCTTGTCTATCTGAAGGACATCAAAGCTCACGCAACACAGAGCATAAATCTGCCAATACGCAACCTCAAAGAACAGCCCTACATCAAACACATGCAACAGGAACTAAAAAATATGACAGTCAAGCTAAAACTAAATCACTCTTTGCTGAAAAAGGCACTAAGCCTAAAATGCAAGGTACTAAGAAGTTTCCATCTTCAAGTGCTCAGACGTCTGTCATTGGTTTGTCTGGTCGTAAAGTGCGTTTCAAGCAGACCAACCTGACTTATGGAATGACCAAAACACAGAAAATGAGGCTGGCATTAAACCAGAAAGACAAAACAGAGACGAGAACAAGGCCTTGTGATGATCAAGCAGAAATGGTTGTTGCAAATGAAAACGTCAAAGGAGAATCTTCAAAACATAAGCCTTTGCGCAAGGCTGAATTAGAAAGAACGTATAGAATAGGCCCGTCCAAGAGATTAGCACTCAGAGAGGTCAAACAAACAGCAGATGTGGAAATTCAGACACATTCTTCCCTGGAAGAGCTTCCACATGAAAATGGAGCTGCACAGAGATATGGGACAAACATAGAAGAGGTGTCAGCAAAAGAAGATCGTGGTGACCCATCAATAGTCAAGAGGAACACCAAAAGCCCAAATAGTTTAGATGTTTTTATTCCAAGATTAGAAGGTGAGCCAGATGAGCGAATTGATCAGGAAGAAGACTGGGCCACAGATGAACATCCAGTGGGGATGCCCATGAATGGATTATTTGGACATACTAGAATCCTGTGCCCAGAACATGATGAGGTTCAAGCAGATTCAACTCTGACCAACTACACTGAGGACTTTGAAGATTCCAAAGCACAATACATGTCGACATCACCGCACTTAGCTTCAGAAAATACTGCAGAAGGTGAAGGTTTGAGACAAAGGTCTAACCTTGACAGATCAAGCACACATTCTGAAAGTAGTTCGGTGTCATCAACACAACCTGTCAAATCTTCTCATTCTCCCGTCAAGAGTAAGTCTGTCAGATCAAAGGCAGGGATTGATGAAACTGGAAGGGCCGACCCCAAGGTGATCGATATCCCTGTGTCGCAACAGGAGGACAGTGTCTCTGAAAACCGGGAACCCCTGAAAGAAACTGCTTTTCACTCCTCATCTGATGAACATGCTGGAAGCTACACAGATGATTTTCTCTCAGTTGGTTCAGAACTTGAAAATGTTTCATCTGACACAGAATATGTTGATAGCATAGATACTAACCAGCAAGCAGCACTTGATTTACCACCTGCAGCGAATAATCTGGGGTACACTTACTAA

Transcript

amic_s0022.g81.t1

AGGCGCCAACATTTCCTGTTGTTGCATCCCGCTAAGATGAGTAATGTTATGTTGAATTTTAGGATGAAGAATGGTTTAAATGATGACTGAGACACTGTTTTCCTTGGAAATTCATGTGGAAAGTGTAAAAAATATCCGACTTCTGTGCAAGCTGCCGGCTCTCTGCTTTCGCATGCTGGATTTCCCTACTATGATTATACATCATGTACCGCCTCTAAGAGCAGAAAAACTGCGTCAAAAACTACTTTTAGAAGACAGAGAAACTATGCTTGATGAACTCAAGGATCGATTTGGACATTTCCATTTCCATAAAGGGAAATCCTGTTTATTCAAAGCAGGCATCGAGACCTTGCAAGCTCAACTTCAAACTGTACCCCTGTACGCGATGTTGATGGATTTGTGGCCTAAAAAACCTACTCTAGTAGGAAGCACCGTGATTCCCTTGAAAGAAGCTGTGAATAAGATTAGCGCAGATGTTTACCAGAAAGGACTTGAAGTGCCCTCTTTCTTTAAAAATGAGGGCGAATTTACGGTTTACAATCTTATGGGGTCTGGTATTGCAACAGTGAAACTGGGTTTCAGGTTGTTGAGTCTTGGGGGTTCACTCATCCCTCATATTCCCAGAGAAGCCTTATCAACCAAAGCCACAAAAAAGCGTGAAATTGGAGGAAAGAATGAGAGATCTGTTGAGAATGTTACAGATTTCCATGCAATACAACTTGGAAGGGAATCAAATGAAATTGAAGAAGGACTTGAGGCAAGATCTGTGGGAAACAAAAGTGACGGGAGAGTGGTGCAAGATAGACAGAGGGAAGGCAGCAAGTGTGACACAGGAGTTCAAACAAATATCTTTGCAGTGAACGTTAATGGCTCTGGAACAAGTGATCAAGACAGGTGGAAAAGTGAAGATGATTTTGTTATCAACAACACATTTTGTCCTCCACCTCTTTTCTATAATTGCAATGCAGCACCTCAGAGTCAATCAGCCTCAGTAGTACCTAGGAAATGTATTCCACAAAGTGGCAGCGGTAGCACAACTCAGATTTCCCATAAGAGGGACAAAATGTCAGATGTAGATTTTTTGTATTATGATCCCAGTTTGGCACAAGCAGATGGATCAATGAAACTTGTTTCAGCTTCAGTACAAACGGATGATAAATTCATGACGTTTGAGGCAGATCAAACTCATTTGGATGTAACTCGGGGATTAAGGAACTTAGAAAATTTTACCTCAGGTAATAGACTTCCGGTTTTGAGCGCTTTGCTTCAAGAATTGTCTTGTCTATCTGAAGGACATCAAAGCTCACGCAACACAGAGCATAAATCTGCCAATACGCAACCTCAAAGAACAGCCCTACATCAAACACATGCAACAGGAACTAAAAAATATGACAGTCAAGCTAAAACTAAATCACTCTTTGCTGAAAAAGGCACTAAGCCTAAAATGCAAGGTACTAAGAAGTTTCCATCTTCAAGTGCTCAGACGTCTGTCATTGGTTTGTCTGGTCGTAAAGTGCGTTTCAAGCAGACCAACCTGACTTATGGAATGACCAAAACACAGAAAATGAGGCTGGCATTAAACCAGAAAGACAAAACAGAGACGAGAACAAGGCCTTGTGATGATCAAGCAGAAATGGTTGTTGCAAATGAAAACGTCAAAGGAGAATCTTCAAAACATAAGCCTTTGCGCAAGGCTGAATTAGAAAGAACGTATAGAATAGGCCCGTCCAAGAGATTAGCACTCAGAGAGGTCAAACAAACAGCAGATGTGGAAATTCAGACACATTCTTCCCTGGAAGAGCTTCCACATGAAAATGGAGCTGCACAGAGATATGGGACAAACATAGAAGAGGTGTCAGCAAAAGAAGATCGTGGTGACCCATCAATAGTCAAGAGGAACACCAAAAGCCCAAATAGTTTAGATGTTTTTATTCCAAGATTAGAAGGTGAGCCAGATGAGCGAATTGATCAGGAAGAAGACTGGGCCACAGATGAACATCCAGTGGGGATGCCCATGAATGGATTATTTGGACATACTAGAATCCTGTGCCCAGAACATGATGAGGTTCAAGCAGATTCAACTCTGACCAACTACACTGAGGACTTTGAAGATTCCAAAGCACAATACATGTCGACATCACCGCACTTAGCTTCAGAAAATACTGCAGAAGGTGAAGGTTTGAGACAAAGGTCTAACCTTGACAGATCAAGCACACATTCTGAAAGTAGTTCGGTGTCATCAACACAACCTGTCAAATCTTCTCATTCTCCCGTCAAGAGTAAGTCTGTCAGATCAAAGGCAGGGATTGATGAAACTGGAAGGGCCGACCCCAAGGTGATCGATATCCCTGTGTCGCAACAGGAGGACAGTGTCTCTGAAAACCGGGAACCCCTGAAAGAAACTGCTTTTCACTCCTCATCTGATGAACATGCTGGAAGCTACACAGATGATTTTCTCTCAGTTGGTTCAGAACTTGAAAATGTTTCATCTGACACAGAATATGTTGATAGCATAGATACTAACCAGCAAGCAGCACTTGATTTACCACCTGCAGCGAATAATCTGGGGTACACTTACTAATCTCCTCGATTACTATCTGTAAGTCTTCTTTCTCATTCATCTCAGTTGGTTCGCACTTAACCGTATGAACATGTGCCAAGCACCTTGCCCATTTGGCTGCTGTTGCTGGATCAACGCCCTGATCAACAACTGTATGCATCAATCCCACTCCCCCCTCCTGGTCAATGCAGCTTTTGAAAATTGCATTGCCCCCAGGCCAAAAGTGGTGTCCATGACTATGCAGTTAGTTGCCAAGCCTTTGAAATGAAGTGAGGCTAAGGGTGACCTGGTTATGATAAAAACCAAACTACTGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A3KMW7	Microtubule-associated protein 10 OS=Bos taurus OX=9913 GN=MAP10 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008655 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14924 all species →	DUF4497	Protein of unknown function (DUF4497)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039302 all species →	Family	Microtubule associated protein 10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21831 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005881 all species →	Cellular Component	cytoplasmic microtubule	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0030496 all species →	Cellular Component	midbody	Interproscan
GO:0031122 all species →	Biological Process	cytoplasmic microtubule organization	Interproscan
GO:0032467 all species →	Biological Process	positive regulation of cytokinesis	Interproscan
GO:0051256 all species →	Biological Process	mitotic spindle midzone assembly	Interproscan
GO:0097431 all species →	Cellular Component	mitotic spindle pole	Interproscan
GO:1990023 all species →	Cellular Component	mitotic spindle midzone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0022.g81.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.