Detailed information of amic_s0022.g99.t2 in Acropora microphthalma

Genomic Location: sc0000022_pilon:1616520...1633198
NR annotation: XP_015751943.1, PREDICTED: doublesex- and mab-3-related transcription factor 3-like isoform X4 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q76L87Doublesex- and mab-3-related transcription factor A2 OS=Oryzias latipes OX=8090 GN=dmrta2 PE=3 SV=1
A4QNP7Doublesex- and mab-3-related transcription factor A2 OS=Xenopus tropicalis OX=8364 GN=dmrta2 PE=2 SV=1
Q2I327Doublesex- and mab-3-related transcription factor A2 OS=Xiphophorus maculatus OX=8083 GN=dmrta2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000886 (this species only)
Transcription factor familyDM · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03474
all species →		DMADMRTA motifDomainInterproscan
PF00751
all species →		DMDM DNA binding domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001275
all species →		DomainDM DNA-binding domainInterproscan
IPR036407
all species →		Homologous_superfamilyDM DNA-binding domain superfamilyInterproscan
IPR009060
all species →		Homologous_superfamilyUBA-like superfamilyInterproscan
IPR005173
all species →		DomainDMRTA motifInterproscan
IPR026607
all species →		FamilyDMRT familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12322
all species →		DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRTInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007548
all species →		Biological Processsex differentiationInterproscan
GO:0046661
all species →		Biological Processmale sex differentiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0022.g99.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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