Gene detail

Detailed information of amic_s0023.g131.t1 in Acropora microphthalma

Genomic Location: sc0000023_pilon:1332388...1335269
NR annotation: XP_029185558.2, G-protein coupled receptor 161-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0023.g131.t1

AGGACTTTTCAAAATTCTATCGCAATTCGACCGCTAATTCGTGTCAAGACGAAGACTTTTCAGAAAAGACTTGTTTTTGGCAGTTTAGAATTCGTGGAGGACAACATCAACAAAGAGCAAAATCTTAATAATGCTCTAAGTGGTCTCTCACGATACGAAAGAAAGAAACGAAGTAAGGAGAGCAAAGATACAAAACATACACCAGTAAAACGCAAAACCTCGTTTTGCACTCGCATGAAGAAAATGCTAAAATTACGCTTGGAATCACGTAACAGTCACATACTTCCTGTTGACGTCCCAAATTGACTTCCATGCTTACAAGCTTGCGAGCAGGCTGGTGTCTTTGTCATTTTTTTCGGCTTGTCAGTATAATTAAAGTTCAAGATACAGTTCTAGGAGCAAGAAAATCCACAATTCCCATACTAACGAGTTATCGACCACCATGGTATGATCTGGATATTTATCACACCTAGAAGCGTCTCGGACTTCTCGGGCTAATGACAAAAACGTTATCTCATAAGATAAGAGCCCTCCGTTGTCCTCTGAATTTTGTGCCTTACAAAAGATTAGCCACAGATTTTGGCTTTTCGAAACTTAAAATGTTTTTTGAAGAAACAATAAATATTTTCTTGAGTTGGTCATTTGTTGGATGTTGGTGAACGTGGAGATATGCTCCCAATGATGGCTGTCATAGGTGACCCCGGTATTCATTTCCATTGTCTGATTGATTTTCGTTAATTTGTAACAAGGGTGTTATTCAATACGGTCATTCTGTCAATATACTTCAAAAACCAAAATACCGAGGGATAAACATTATATTGAATTTCACGTCTTCGTGTCGCGCGCCCGCTTAAAGAAAGTTTCTGCGAACACCGACGAAGACATGACAGAAAAGACAACCACGGGCGCGTTAAAGAATGAAACTTCGAGCGTTTACTTGACTGATACAGCAGCCGCCATTCAATCGACAGCCATACTTTTGCTCGCCTTATCTTCTTTGATTTGCAATGCTTTGGTAGGGTTTGTGCTCATAAAAAAACCAGAACTTCTGTCTCATTCTTCAGCGAGAAAGCTTCTCCTCAACCTAACAGCCTCCAGCTTCCTTCAGTCCTTCATCGTTTTACCTTTTGTGTTCGCTTCGAGTTTGAAACAAAGTTGGATATTTGGAGAAGCATGGTGTCAGGCAACTGGATTTTTTACCATTCTGTTCTCCGCAGCATGTTTGGGGATGGTGATGTTTTTGAGTATAGATCGATATCACTGTATAGTCAACCCACTGATATACGACAGCAGAATGTCACCTACTCGCACAAATGTCTTCTGCGTTTGTACATGGCTAGCAAGTGTTTTCGTTGCATCATTGCCTCTTGCTGGCTGGGGAAAATATGGATATCAGCCTGCCAAAGTTTCATGTACAGTTGTTTGGAGTGACTCATTGAGTGAAGGGTACACCAAACTTTATGCCATCGTTACCTTATTGCTAACGTTGGTAGTCATGGTAGTAGCATATTATCACATATTAAAAGCAGCCCGTCGACAAGCCAGGGTTGTACCAATTGCAATATTGCCTGCTTCTTTGCATTCAGGATTGCGGACATGTTCTCGGTCATTAAATCGTAACTCCATAGCCTCAAATGCCAGCGCGTTTACCGGCTCAAAAGCTCTGCGGACGACTATTTTAGTACTTGGGACTGTTATATTTTGTTGGGGACCCTATGTGATATCAATTCTTTTAGAATCCGAGCAAATACCTGTGCGATACGAATTACAGACAACTTTTGTTATGGTGTCATACTCTAGCGTCTTGGTGTATCCCATTATCTACGGTTTTCATATTCGAGTGATCCGACGCAGTATTAAGAGGATTTTGTTTTCCCTTATACTCAGAAGGTACAACGCCGTGCGACCAGCCAGTGATACTGGATTCATTGTGTCACCATCTGCGGCAATGTTTAGAAATCGGTCACTGTCCGAGGGCTCAGTCAATTCATTAGATATTGCGCTTTCACCGAGAAGGGAGAGCGAGAGTCTGTGGACACTACCAGTTATTAGAGAAGAAATGGAAAAGGACGTTAAACCAAATGGAACCAGATCAACTGAGGTGACTGACTCCGAATTCTGTAACATTCCGGGAGGCGTAAATGTGTAACTAAATTTGTGTTTTCAAGAAACGCCATCACAGTTGCATTCAGCAAACCAGGGATTAAGAGCCCTTTAAAAGTGTATCAATCGAAAAGTTTAACGTCTTAGGCATCTAAATTCTAGATTAAAGTTTAAATTCCTTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q90X46	G-protein coupled receptor 161 OS=Danio rerio OX=7955 GN=gpr161 PE=2 SV=2
Q98998	5-hydroxytryptamine receptor 1A OS=Xenopus laevis OX=8355 GN=htr1a PE=2 SV=1
O42385	5-hydroxytryptamine receptor 1A-alpha OS=Takifugu rubripes OX=31033 GN=htr1aa PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009817 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22752 all species →	G PROTEIN-COUPLED RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08412	GPR39; G protein-coupled receptor 39	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.