Gene detail

Detailed information of amic_s0023.g199.t1 in Acropora microphthalma

Genomic Location: sc0000023_pilon:2102344...2112158
NR annotation: XP_015749248.1, PREDICTED: uncharacterized protein LOC107329029 isoform X2 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0023.g199.t1

GATTCAACAACAGCAAGGGAAACAACCACTGACCACCAACGTAAGAGCTGCACCTTGCACACTGATTTGCTAACTAAAGCAGACGGTGTTGTAATCTATAATCGAATCTTAAAACTTCGGCTAATGTCATATTAGGTGAGACTAGTTCAGGAAAAAGCAGTTTGATCAATCTAATTATGGGAGAAGAACTTCTTCCATATTCTGTTCTTAGTACAACTTCCACTATATGTGAACTTAAGTTTGGAGCAGAACGCAAAATTGTAGCCCACTTCAAGGATAAGGATCCAGACACGGGACTTCCAACCAAAGAAATTCAATTAAAAGAAAATCCAAACACGGCCTCAGAAAAGCAAAGCTACCTTGAACAGATTTCACCTTTTGTCCACGTCAAGAACGATCGCGAGAAGGGCTCAATATACAAGAAGATTGAACTATTTTGGCCTCATGATCTACTGGAGAAAGGAATAGTTATTATTGACAGTCCTGGTGTTGGAGAGTCTGATATTATGGACGAAATCGTCACCGAGTATCTCCCTCGAGCCTTTGCTTTTATTTACACCATTAACAGTTCTAATGCCGGAGGAGTTCAGAAAGACAGGGTCAACGTGATAATGAGTTTGCGAGCAGACATAAAAAACAGATGGTTAGACTTTCTTCTCTCTCGGATAATTTTCCAAGCAAAAGCATTCATCTCAAACGCTTCCAAAGATCGACAGGAGGTACTCCTTAAAATGAGAGACATTCTACAACGCTTGGTGGCCATTGAAACACAGCAAAACAAAGTAATGGAAGAACTTACAGAATACTTATCTAAAGGGGTTAATTTTGCTCTAACGCAGCTCTCTAAATATCTCTCTTCGGAAGACGCCAAGAAGCGCTTTACCTCATGGACCCTGGATGACGCCCCGAAAGCAGAAATGTCCTGGGAAGCGACCGACAACCAGATCATGAAAACACTTTCACGACGACTGCGAGACATCATTGAGCAATGGGAAGAGGATAACAAAGTCTTTTCAAATGCTAGAGAATCCCTCCTAAAACATTTTCAGCAGCGTTACAATTTTGTCGAGGAGCAATTGAGGAATCTTCACAGTGTTGTCATCGCTGATAATGACATCGCTGATAACGTTGGTGGCAATGGAGCGAGCAACACAGATAGTAGTCTTACAGTTGCCCAGAAGGTCGTCGTTGGAGTTACAAGTCCAATCTGGATTCCCATTAGTTTAGTCGCTTTGGTGATTGGTGCTCCAGTTGTAGGCATTAAGGCCTTAAAGGAAAAGTTGCAAGATAGAAAGAAGTTGAACAAATACAAAGAAGACAAGTGTGCTTTCATGACGAAGGAGTCAGCACAATATCTCGACGCAGCCAATAATCAATTTGTTCTTCGAAAGTTCGTAATCGAACAACTGCGAGAAGCCCAGCTGTGTCTTCAAAGGATTAAAGCGCGCATCCCAGAGCTGATCCAAGCTGACAAAATGTTGTGTCAGCAACTCATCGATGAGACACGTGGGAAAAAGCAGCTACTTGATCTCTATCAGCCCTTACTGGCGATGGCATCTGAGCTAAGAGGCAATCTAGCAGTATTTGGATTCAAGGAAGTGTTTGGCGAGGATATCAGCCGCAAGAAATTGCACTGGCAAAAGGATGAATCCCATCGCCTTGGCTGTGGTGCATTTGCTGTTGTGTACAAAGGAATTATGACCAAATATGGACGCAAGCAACCTGTTGCACTGAAGGTGTACAGCGAGGCACTCCATGCCATGAACGCCTGTGAAATCCTGGCAGAGGTTGAAATTTTGAGAAAATTGAACCACCCTTCCATTGTTAAGTTCCACGGGTCATCCCTGCTACGCGATGATAGAGAAACGAGGGTGATTTTAGTCATGGAAAAATGCAAGGAGAGCTTGAAGAGTCGACTTTACGGGAAACCAGAACATTGTCCAGGAAAAAGTAGAAATTCTGAAGTCTCCAAAGCAGTTTGCAATTGGGCAATACAGATCACCGAAGCTCTGGATTACATACATAAACAAGGGATTATCCACAGAGACCTTAAACTGGACAACATCTTGGTATGTTAAAACGTTAAAATTTTCTTTTATATAATCTTGAAGAATTCAAAGAACTACATCATCTTCGTGGACAATAGTATTACTAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P41892	Cell division control protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdc7 PE=1 SV=1
Q40541	Mitogen-activated protein kinase kinase kinase NPK1 OS=Nicotiana tabacum OX=4097 GN=NPK1 PE=1 SV=1
P27636	Cell division control protein 15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC15 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000357 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR26392 all species →	MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0023.g199.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.