Detailed information of amic_s0023.g253.t2 in Acropora microphthalma

Genomic Location: sc0000023_pilon:2849471...2868078
NR annotation: XP_029186079.2, histone-lysine N-methyltransferase 2A-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O08550Histone-lysine N-methyltransferase 2B OS=Mus musculus OX=10090 GN=Kmt2b PE=1 SV=3
Q9UMN6Histone-lysine N-methyltransferase 2B OS=Homo sapiens OX=9606 GN=KMT2B PE=1 SV=1
Q03164Histone-lysine N-methyltransferase 2A OS=Homo sapiens OX=9606 GN=KMT2A PE=1 SV=5
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004602 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05964
all species →
FYRNF/Y-rich N-terminusFamilyInterproscan
PF00628
all species →
PHDPHD-fingerDomainInterproscan
PF05965
all species →
FYRCF/Y rich C-terminusFamilyInterproscan
PF02008
all species →
zf-CXXCCXXC zinc finger domainDomainInterproscan
PF00856
all species →
SETSET domainFamilyInterproscan
PF13771
all species →
zf-HC5HC2HPHD-like zinc-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR003888
all species →
Conserved_siteFY-rich, N-terminalInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787
all species →
DomainZinc finger, PHD-fingerInterproscan
IPR001214
all species →
DomainSET domainInterproscan
IPR003889
all species →
Conserved_siteFY-rich, C-terminalInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan
IPR002857
all species →
DomainZinc finger, CXXC-typeInterproscan
IPR046341
all species →
Homologous_superfamilySET domain superfamilyInterproscan
IPR036427
all species →
Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR003616
all species →
DomainPost-SET domainInterproscan
IPR047219
all species →
DomainHistone-lysine N-methyltransferase 2A/2B, SET domainInterproscan
IPR034732
all species →
DomainExtended PHD (ePHD) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45838
all species →
HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0035097
all species →
Cellular Componenthistone methyltransferase complexInterproscan
GO:0042800
all species →
Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0045893
all species →
Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0051568
all species →
Biological Processobsolete histone H3-K4 methylationInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14959MLL4; [histone H3]-lysine4 N-trimethyltransferase MLL4EC:2.1.1.354
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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