Detailed information of amic_s0023.g26.t1 in Acropora microphthalma

Genomic Location: sc0000023_pilon:191186...200037
NR annotation: XP_044180109.1, uncharacterized protein LOC114952864 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000863 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00229
all species →		TNFTNF(Tumour Necrosis Factor) family DomainInterproscan
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008983
all species →		Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR006052
all species →		DomainTumour necrosis factor domainInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11471
all species →		TUMOR NECROSIS FACTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005164
all species →		Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0006955
all species →		Biological Processimmune responseInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0023.g26.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP