Detailed information of amic_s0023.g265.t1 in Acropora microphthalma

Genomic Location: sc0000023_pilon:2959739...2961010
NR annotation: XP_029185353.2, DNA repair protein XRCC2-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9CX47DNA repair protein XRCC2 OS=Mus musculus OX=10090 GN=Xrcc2 PE=1 SV=1
O43543DNA repair protein XRCC2 OS=Homo sapiens OX=9606 GN=XRCC2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008996 (this species only)

 Pfam domain
No Pfam domain signature was detected for amic_s0023.g265.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR020588
all species →		DomainDNA recombination and repair protein RecA-like, ATP-binding domainInterproscan
IPR030547
all species →		FamilyDNA repair protein XRCC2Interproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46644
all species →		DNA REPAIR PROTEIN XRCC2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0140664
all species →		Molecular FunctionATP-dependent DNA damage sensor activityInterproscan
GO:0000400
all species →		Molecular Functionfour-way junction DNA bindingInterproscan
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005657
all species →		Cellular Componentreplication forkInterproscan
GO:0005813
all species →		Cellular ComponentcentrosomeInterproscan
GO:0033063
all species →		Cellular ComponentRad51B-Rad51C-Rad51D-XRCC2 complexInterproscan
GO:0042148
all species →		Biological ProcessDNA strand invasionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0023.g265.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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