Detailed information of amic_s0023.g303.t1 in Acropora microphthalma

Genomic Location: sc0000023_pilon:3309359...3311246
NR annotation: XP_015767684.1, PREDICTED: leucine-rich repeat-containing protein 58-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32NT4Leucine-rich repeat-containing protein 58 OS=Xenopus laevis OX=8355 GN=lrrc58 PE=2 SV=1
A4IHG1Leucine-rich repeat-containing protein 58 OS=Xenopus tropicalis OX=8364 GN=lrrc58 PE=2 SV=1
Q3UGP9Leucine-rich repeat-containing protein 58 OS=Mus musculus OX=10090 GN=Lrrc58 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007707 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00560
all species →		LRR_1Leucine Rich RepeatRepeatInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR050715
all species →		FamilyLeucine-rich repeat and signaling effector domain-containing proteinInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45752
all species →		LEUCINE-RICH REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0023.g303.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP