Detailed information of amic_s0024.g21.t3 in Acropora microphthalma

Genomic Location: sc0000024_pilon:209806...226830
NR annotation: XP_029191030.2, LOW QUALITY PROTEIN: RING finger protein 17-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4R3G4RING finger protein 17 OS=Macaca fascicularis OX=9541 GN=RNF17 PE=2 SV=2
Q9BXT8RING finger protein 17 OS=Homo sapiens OX=9606 GN=RNF17 PE=1 SV=3
Q99MV7RING finger protein 17 OS=Mus musculus OX=10090 GN=Rnf17 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003362 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13445
all species →
zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00567
all species →
TUDORTudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR002999
all species →
DomainTudor domainInterproscan
IPR000315
all species →
DomainB-box-type zinc fingerInterproscan
IPR027370
all species →
DomainZinc finger, RING-type, eukaryoticInterproscan
IPR039117
all species →
FamilyRING finger protein 17Interproscan
IPR035437
all species →
Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16442
all species →
RING FINGER PROTEIN 17Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0024.g21.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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