Detailed information of amic_s0024.g48.t1 in Acropora microphthalma

Genomic Location: sc0000024_pilon:745967...750810
NR annotation: XP_029184194.1, ribosome production factor 2 homolog [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JJ80Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2
Q2YDN6Ribosome production factor 2 homolog OS=Bos taurus OX=9913 GN=RPF2 PE=2 SV=1
Q9H7B2Ribosome production factor 2 homolog OS=Homo sapiens OX=9606 GN=RPF2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005457 (this species only)

 Pfam domain
No Pfam domain signature was detected for amic_s0024.g48.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039770
all species →		FamilyRibosome biogenesis protein Rpf2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12728
all species →		BRIX DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000027
all species →		Biological Processribosomal large subunit assemblyInterproscan
GO:0000463
all species →		Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000470
all species →		Biological Processmaturation of LSU-rRNAInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0024.g48.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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