Gene detail

Detailed information of amic_s0025.g76.t1 in Acropora microphthalma

Genomic Location: sc0000025_pilon:1218644...1237118
NR annotation: XP_029214015.1, eukaryotic translation initiation factor 2 subunit 3, Y-linked [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P20461	Eukaryotic translation initiation factor 2 subunit 3 OS=Sus scrofa OX=9823 GN=EIF2S3 PE=1 SV=2
C9WPN6	Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2
Q2KHU8	Eukaryotic translation initiation factor 2 subunit 3 OS=Bos taurus OX=9913 GN=EIF2S3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007527 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR044127 all species →	Domain	Initiation factor eIF2 gamma, domain 2	Interproscan
IPR044128 all species →	Domain	Initiation factor eIF2 gamma, GTP-binding domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR050543 all species →	Family	Eukaryotic Initiation Factor 2 Gamma Subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42854 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0001731 all species →	Biological Process	formation of translation preinitiation complex	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0005850 all species →	Cellular Component	eukaryotic translation initiation factor 2 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0025.g76.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.